Os09g0453100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0453100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.51 | 0.471 | 11 | -1.52 | 1.18 | -1.75 | 0.0254 | -0.238 | 0.187 | 20.1 | 24.39 | 142 | -- | -- |
| 100.6 | 0.467 | 11 | -1.55 | 1.18 | -1.72 | 0.01 | -- | 0.183 | 20.1 | 24.36 | 141 | -- | -- |
| 100.5 | 0.467 | 11 | -1.52 | 1.18 | -1.77 | -- | -0.26 | 0.193 | 20.1 | 24.22 | 139 | -- | -- |
| 100.6 | 0.467 | 11 | -1.55 | 1.18 | -1.73 | -- | -- | 0.183 | 20.1 | 24.36 | 141 | -- | -- |
| 139.28 | 0.55 | 11 | -1.92 | -- | -2.18 | -- | 0.895 | -0.03 | -- | 29.3 | 495 | -- | -- |
| 142.19 | 0.559 | 10.9 | -1.14 | 1.2 | -- | -0.0234 | -- | 0.481 | 19.3 | -- | -- | -- | -- |
| 142.19 | 0.558 | 10.9 | -1.14 | 1.2 | -- | -- | -- | 0.481 | 19.3 | -- | -- | -- | -- |
| 141.02 | 0.553 | 11 | -1.7 | -- | -2.13 | -- | -- | 0.0224 | -- | 29.02 | 470 | -- | -- |
| 157.44 | 0.584 | 10.9 | -- | 1.23 | -1.13 | -- | -- | 0.422 | 19.8 | 23.68 | 53 | -- | -- |
| 219.13 | 0.692 | 10.9 | -1.16 | -- | -- | -- | -- | 0.461 | -- | -- | -- | -- | -- |
| 176.18 | 0.621 | 10.9 | -- | 1.21 | -- | -- | -- | 0.608 | 19.3 | -- | -- | -- | -- |
| 209.55 | 0.674 | 10.9 | -- | -- | -1.54 | -- | -- | 0.321 | -- | 29.4 | 426 | -- | -- |
| 254.37 | 0.744 | 10.8 | -- | -- | -- | -- | -- | 0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.01 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 23 |
| 5 | 99.47 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 6 | 99.55 | temperature | 10 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 12 | 100.23 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 13 | 100.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 16 | 100.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 19 | 101.07 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 26 | 101.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 30 | 101.44 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 32 | 101.48 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 39 | 101.75 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 40 | 101.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 48 | 102.03 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 93 | 102.86 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 118 | 103.17 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 199 | 104.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 201 | 104.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 206 | 104.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 230 | 104.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 17 |
| 235 | 104.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 253 | 104.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 258 | 104.60 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 262 | 104.62 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 263 | 104.62 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 9 |
| 267 | 104.64 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 269 | 104.64 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 12 |
| 270 | 104.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 298 | 104.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 339 | 104.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 340 | 104.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 350 | 104.87 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 354 | 104.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 14 | 16 |
| 365 | 104.91 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 368 | 104.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 417 | 105.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 420 | 105.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 429 | 105.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 434 | 105.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 439 | 105.06 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 516 | 105.17 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 528 | 105.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 538 | 105.22 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 540 | 105.22 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 23 |
| 577 | 105.29 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 582 | 105.29 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 603 | 105.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 626 | 105.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 653 | 105.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 709 | 105.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 819 | 105.71 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 890 | 105.84 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |