Os09g0452900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os09g0452900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.57 | 0.608 | 8.92 | 0.595 | 0.538 | 1.51 | -0.22 | 0.777 | 0.583 | 8.25 | 27.85 | 80 | -- | -- |
| 168.4 | 0.604 | 8.9 | 0.726 | 0.55 | 1.47 | -0.305 | -- | 0.614 | 8.2 | 27.95 | 70 | -- | -- |
| 167.56 | 0.603 | 8.91 | 0.587 | 0.548 | 1.54 | -- | 0.844 | 0.595 | 8.56 | 27.84 | 70 | -- | -- |
| 168.6 | 0.605 | 8.9 | 0.729 | 0.544 | 1.52 | -- | -- | 0.622 | 8.56 | 28.04 | 70 | -- | -- |
| 179.96 | 0.625 | 8.93 | 0.604 | -- | 1.6 | -- | 0.887 | 0.595 | -- | 28.5 | 231 | -- | -- |
| 198.05 | 0.66 | 8.98 | 0.352 | 0.726 | -- | -1 | -- | 0.292 | 5.7 | -- | -- | -- | -- |
| 200.41 | 0.663 | 8.97 | 0.347 | 0.721 | -- | -- | -- | 0.296 | 5.9 | -- | -- | -- | -- |
| 180.92 | 0.626 | 8.91 | 0.762 | -- | 1.59 | -- | -- | 0.642 | -- | 28.7 | 246 | -- | -- |
| 181.3 | 0.631 | 8.93 | -- | 0.616 | 1.19 | -- | -- | 0.478 | 7.92 | 28.04 | 70 | -- | -- |
| 227.39 | 0.705 | 8.98 | 0.369 | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
| 203.6 | 0.667 | 8.98 | -- | 0.727 | -- | -- | -- | 0.258 | 5.88 | -- | -- | -- | -- |
| 194.82 | 0.65 | 8.94 | -- | -- | 1.35 | -- | -- | 0.5 | -- | 29.56 | 253 | -- | -- |
| 230.98 | 0.709 | 8.99 | -- | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 157.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 157.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 157.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 159.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 6 | 159.33 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 7 | 159.38 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 8 | 159.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 12 | 159.72 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 14 | 159.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 16 | 159.80 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 19 | 159.80 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 22 | 159.82 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 46 | 159.82 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 50 | 159.83 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 65 | 160.01 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 157 | 160.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 3 |
| 207 | 162.28 | temperature | 25.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 226 | 162.82 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 231 | 163.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 9 |
| 232 | 163.12 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 6 |
| 239 | 163.39 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 242 | 163.44 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 246 | 163.54 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 263 | 163.71 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 268 | 163.75 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 269 | 163.77 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 270 | 163.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 16 |
| 272 | 163.99 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 277 | 164.08 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 279 | 164.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 280 | 164.10 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 15 |
| 302 | 164.41 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 309 | 164.58 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 310 | 164.66 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 311 | 164.66 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 312 | 164.69 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 322 | 164.88 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 328 | 164.95 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 331 | 164.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 338 | 165.05 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 400 | 165.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 416 | 165.71 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 453 | 165.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 486 | 166.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 524 | 166.13 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 12 | 13 |
| 559 | 166.19 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 762 | 166.55 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 789 | 166.58 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 18 |
| 875 | 166.66 | atmosphere | 1005.0 | 14400 | < th | dose dependent | no | NA | NA |
| 928 | 166.72 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 23 |