Os09g0452800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
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Os09g0452800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A1, pepsin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.06 | 0.656 | 10.1 | -0.942 | 1.71 | -0.648 | 0.706 | 2.31 | -0.868 | 7.56 | 24.63 | 46 | -- | -- |
| 215.21 | 0.683 | 10 | -0.386 | 1.65 | -0.581 | 0.485 | -- | -0.601 | 7.78 | 24.06 | 69 | -- | -- |
| 196.45 | 0.653 | 10.1 | -0.922 | 1.71 | -0.638 | -- | 2.3 | -0.864 | 7.57 | 24.62 | 46 | -- | -- |
| 215.17 | 0.683 | 10 | -0.329 | 1.64 | -0.577 | -- | -- | -0.59 | 7.83 | 24.09 | 53 | -- | -- |
| 338.6 | 0.862 | 10.1 | -0.972 | -- | -0.65 | -- | 1.87 | -0.757 | -- | 24 | 40 | -- | -- |
| 238.09 | 0.723 | 9.94 | -0.104 | 1.64 | -- | 0.245 | -- | -0.315 | 8.3 | -- | -- | -- | -- |
| 238.27 | 0.723 | 9.94 | -0.096 | 1.64 | -- | -- | -- | -0.314 | 8.32 | -- | -- | -- | -- |
| 355.88 | 0.879 | 10 | -0.359 | -- | -0.643 | -- | -- | -0.551 | -- | 23.2 | 19 | -- | -- |
| 217.88 | 0.687 | 10 | -- | 1.64 | -0.541 | -- | -- | -0.551 | 7.84 | 24 | 52 | -- | -- |
| 386.75 | 0.919 | 9.99 | -0.0857 | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
| 238.51 | 0.722 | 9.94 | -- | 1.64 | -- | -- | -- | -0.304 | 8.33 | -- | -- | -- | -- |
| 359.07 | 0.883 | 10 | -- | -- | -0.593 | -- | -- | -0.495 | -- | 23.26 | 18 | -- | -- |
| 386.94 | 0.918 | 9.98 | -- | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.62 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 16 |
| 16 | 188.73 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 23 | 190.02 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 9 |
| 28 | 190.47 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 6 |
| 35 | 191.46 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 9 |
| 45 | 192.20 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 56 | 193.02 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 14 |
| 62 | 193.50 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 73 | 193.98 | temperature | 25.0 | 270 | > th | dose independent | sin | 17 | NA |
| 83 | 194.25 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 89 | 194.41 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 14 |
| 91 | 194.58 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 17 |
| 93 | 194.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 96 | 194.68 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 107 | 194.79 | temperature | 25.0 | 270 | < th | dose independent | sin | 18 | NA |
| 110 | 194.84 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 113 | 194.92 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 119 | 195.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 125 | 195.12 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 14 |
| 163 | 195.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 173 | 195.83 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 183 | 195.95 | temperature | 25.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 197 | 196.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 203 | 196.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 204 | 196.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 221 | 196.60 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 224 | 196.63 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 12 |
| 226 | 196.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 240 | 196.80 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 246 | 196.85 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 252 | 196.90 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 256 | 196.93 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 257 | 196.93 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 264 | 196.96 | temperature | 25.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 270 | 197.00 | radiation | 1.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 289 | 197.09 | temperature | 25.0 | 10 | < th | dose independent | rect. | 10 | 20 |
| 317 | 197.33 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 22 |
| 318 | 197.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 322 | 197.37 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 333 | 197.46 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 336 | 197.52 | radiation | 1.0 | 720 | < th | dose independent | sin | 20 | NA |
| 348 | 197.60 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 377 | 197.82 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 378 | 197.82 | temperature | 25.0 | 10 | < th | dose independent | rect. | 8 | 23 |
| 381 | 197.83 | humidity | 90.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 386 | 197.85 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 413 | 198.05 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 437 | 198.15 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 438 | 198.15 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 444 | 198.18 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 445 | 198.19 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 470 | 198.30 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 5 |
| 506 | 198.47 | temperature | 25.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 519 | 198.53 | humidity | 90.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 549 | 198.71 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 565 | 198.74 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 570 | 198.76 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 583 | 198.84 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 589 | 198.87 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 595 | 198.89 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 604 | 198.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 609 | 198.98 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 645 | 199.10 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 649 | 199.11 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 20 |
| 674 | 199.19 | temperature | 25.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 697 | 199.31 | temperature | 25.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 719 | 199.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 721 | 199.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 727 | 199.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 741 | 199.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 743 | 199.55 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 747 | 199.56 | temperature | 25.0 | 30 | < th | dose independent | no | NA | NA |
| 750 | 199.57 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 763 | 199.62 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 764 | 199.62 | temperature | 25.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 767 | 199.63 | temperature | 25.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 779 | 199.67 | temperature | 25.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 794 | 199.74 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 795 | 199.74 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 803 | 199.77 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 804 | 199.78 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 806 | 199.79 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 816 | 199.82 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 819 | 199.82 | temperature | 25.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 825 | 199.83 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 836 | 199.85 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 840 | 199.85 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 887 | 199.94 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 893 | 199.96 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 896 | 199.97 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 932 | 200.05 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 954 | 200.08 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 958 | 200.10 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 19 |
| 970 | 200.14 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 987 | 200.19 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 999 | 200.23 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 2 |