Os09g0451500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioredoxin domain 2 containing protein.
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Os09g0451500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Thioredoxin domain 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.26 | 0.513 | 11.5 | -0.103 | 0.584 | -0.504 | 0.332 | 1.51 | 0.372 | 13.9 | 20.5 | 228 | -- | -- |
| 127.48 | 0.526 | 11.4 | 0.16 | 0.527 | -0.611 | -0.134 | -- | 0.443 | 14 | 20.6 | 195 | -- | -- |
| 119.64 | 0.509 | 11.5 | -0.0829 | 0.581 | -0.52 | -- | 1.41 | 0.372 | 14 | 20.5 | 228 | -- | -- |
| 127.52 | 0.526 | 11.4 | 0.181 | 0.55 | -0.623 | -- | -- | 0.431 | 14 | 20.54 | 195 | -- | -- |
| 138.5 | 0.548 | 11.5 | -0.113 | -- | -0.694 | -- | 1.23 | 0.326 | -- | 20.6 | 195 | -- | -- |
| 141.75 | 0.558 | 11.4 | 0.372 | 0.671 | -- | -0.172 | -- | 0.559 | 14.1 | -- | -- | -- | -- |
| 141.85 | 0.558 | 11.4 | 0.367 | 0.67 | -- | -- | -- | 0.558 | 14.1 | -- | -- | -- | -- |
| 144.65 | 0.56 | 11.5 | 0.125 | -- | -0.773 | -- | -- | 0.393 | -- | 20.53 | 175 | -- | -- |
| 128.37 | 0.528 | 11.4 | -- | 0.554 | -0.653 | -- | -- | 0.424 | 14 | 20.5 | 198 | -- | -- |
| 168.78 | 0.607 | 11.4 | 0.339 | -- | -- | -- | -- | 0.542 | -- | -- | -- | -- | -- |
| 145.4 | 0.564 | 11.4 | -- | 0.663 | -- | -- | -- | 0.517 | 14 | -- | -- | -- | -- |
| 145.04 | 0.561 | 11.5 | -- | -- | -0.798 | -- | -- | 0.375 | -- | 20.56 | 181 | -- | -- |
| 171.8 | 0.612 | 11.4 | -- | -- | -- | -- | -- | 0.504 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.06 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 2 | 112.24 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 112.59 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 5 | 113.04 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 19 | 114.67 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 62 | 116.30 | humidity | 80 | 14400 | > th | dose dependent | sin | 7 | NA |
| 68 | 116.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 88 | 116.68 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 22 | 18 |
| 144 | 117.46 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 152 | 117.54 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 169 | 117.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 172 | 117.66 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 190 | 117.80 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 23 | 20 |
| 203 | 117.89 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 206 | 117.90 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 207 | 117.90 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 235 | 118.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 253 | 118.11 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 257 | 118.13 | atmosphere | 1005 | 270 | > th | dose dependent | sin | 8 | NA |
| 262 | 118.15 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 272 | 118.18 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 291 | 118.28 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 300 | 118.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 309 | 118.37 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 21 |
| 332 | 118.49 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 338 | 118.51 | atmosphere | 1005 | 30 | > th | dose dependent | sin | 6 | NA |
| 345 | 118.52 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 362 | 118.56 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 21 |
| 363 | 118.57 | humidity | 70 | 43200 | < th | dose independent | sin | 8 | NA |
| 376 | 118.61 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 386 | 118.64 | humidity | 70 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 416 | 118.72 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 427 | 118.73 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 12 |
| 435 | 118.75 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 440 | 118.76 | humidity | 70 | 43200 | > th | dose independent | sin | 8 | NA |
| 441 | 118.76 | humidity | 80 | 43200 | < th | dose dependent | sin | 5 | NA |
| 451 | 118.77 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 20 |
| 468 | 118.79 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 476 | 118.79 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 481 | 118.80 | humidity | 70 | 43200 | < th | dose dependent | no | NA | NA |
| 503 | 118.82 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 23 |
| 510 | 118.83 | humidity | 90 | 14400 | > th | dose independent | sin | 4 | NA |
| 512 | 118.83 | humidity | 70 | 43200 | < th | dose dependent | sin | 3 | NA |
| 523 | 118.84 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 551 | 118.86 | wind | 3 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 647 | 118.94 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 706 | 119.01 | humidity | 90 | 14400 | < th | dose independent | sin | 4 | NA |
| 713 | 119.01 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 721 | 119.02 | humidity | 70 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 738 | 119.04 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 770 | 119.07 | temperature | 20 | 1440 | < th | dose dependent | rect. | 24 | 14 |
| 804 | 119.11 | humidity | 70 | 43200 | < th | dose dependent | sin | 14 | NA |
| 843 | 119.15 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 882 | 119.19 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 890 | 119.19 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 893 | 119.20 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 914 | 119.22 | humidity | 50 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 937 | 119.24 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 940 | 119.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 956 | 119.26 | temperature | 20 | 1440 | < th | dose dependent | sin | 6 | NA |
| 966 | 119.27 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 993 | 119.29 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 996 | 119.29 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 1 |