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Os09g0450700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0222) R2 : 0.742
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.07 (0.0573) R2dC : 0.743 R2C : 0.739
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.097 (0.0467) R2dN8 : 0.00316 R2N8 : -0.000772
σ : 0.418
deviance : 80.03
__
_____
C
peak time of C : 19.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.17 0.373 12.2 0.769 2.06 0.658 -0.535 -2.03 0.0675 19.4 19.66 1588 -- --
63.71 0.372 12.2 0.746 2.04 1.38 -0.792 -- 0.0603 19.5 18.3 2101 -- --
63.92 0.372 12.2 0.773 2.05 0.721 -- -2.04 0.0643 19.4 19.39 1583 -- --
64.93 0.375 12.3 0.701 2.08 1.38 -- -- 0.0461 19.5 18.21 2003 -- --
288.89 0.792 12.2 0.777 -- 1.02 -- -2.18 0.0488 -- 19 1530 -- --
73.59 0.402 12.3 0.422 2.08 -- -0.709 -- -0.0468 19.4 -- -- -- --
74.97 0.405 12.3 0.438 2.08 -- -- -- -0.0482 19.4 -- -- -- --
287.21 0.789 12.2 0.843 -- 1.52 -- -- 0.059 -- 18.41 2949 -- --
75.22 0.404 12.3 -- 2.06 1.17 -- -- -0.074 19.4 16.06 1389 -- --
304.72 0.816 12.2 0.405 -- -- -- -- -0.0816 -- -- -- -- --
80.03 0.418 12.3 -- 2.07 -- -- -- -0.097 19.4 -- -- -- --
300.26 0.807 12.2 -- -- 2.03 -- -- -0.0711 -- 14.83 1492 -- --
309.05 0.821 12.2 -- -- -- -- -- -0.127 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.37 humidity 50.0 14400 > th dose independent rect. 5 4
2 55.56 temperature 20.0 30 > th dose independent rect. 5 17
6 56.04 temperature 15.0 270 > th dose independent rect. 24 23
8 56.44 temperature 15.0 270 > th dose independent rect. 5 23
9 56.60 temperature 15.0 270 > th dose independent rect. 1 21
12 56.82 radiation 1.0 30 > th dose independent rect. 18 14
16 57.01 radiation 1.0 10 < th dose dependent rect. 22 19
17 57.03 radiation 1.0 30 > th dose independent rect. 5 3
30 57.11 radiation 1.0 10 < th dose independent rect. 22 18
34 57.18 temperature 15.0 270 > th dose independent rect. 2 19
41 57.26 temperature 15.0 270 > th dose independent rect. 16 15
43 57.30 wind 5.0 90 < th dose independent rect. 22 6
51 57.38 temperature 30.0 10 < th dose dependent rect. 22 7
53 57.42 temperature 30.0 90 < th dose dependent rect. 21 7
56 57.54 radiation 1.0 30 > th dose independent sin 10 NA
66 57.65 humidity 50.0 90 > th dose dependent rect. 21 7
73 57.75 precipitation 0.1 90 < th dose independent rect. 21 7
74 57.75 precipitation 0.1 90 < th dose dependent rect. 21 7
76 57.78 wind 5.0 270 < th dose dependent rect. 4 2
77 57.79 wind 9.0 90 < th dose dependent rect. 21 7
80 57.81 temperature 10.0 90 > th dose independent rect. 21 7
81 57.81 temperature 30.0 90 < th dose independent rect. 21 7
82 57.81 humidity 50.0 90 > th dose independent rect. 21 7
85 57.81 atmosphere 995.0 90 > th dose independent rect. 21 7
86 57.81 radiation 1.0 90 < th dose independent rect. 21 7
91 57.81 radiation 1.0 10 < th dose independent rect. 22 14
94 57.81 atmosphere 1015.0 90 < th dose independent rect. 4 17
95 57.81 radiation 1.0 90 < th dose dependent rect. 21 7
121 57.82 radiation 1.0 10 < th dose dependent rect. 22 10
128 57.83 radiation 1.0 10 < th dose independent rect. 22 10
136 57.84 wind 9.0 90 < th dose dependent rect. 4 4
151 57.87 precipitation 0.1 90 < th dose independent rect. 4 17
152 57.87 precipitation 0.1 90 < th dose dependent rect. 4 17
156 57.92 temperature 10.0 270 > th dose dependent rect. 13 9
164 57.95 radiation 1.0 30 < th dose dependent sin 10 NA
166 57.96 radiation 1.0 10 < th dose dependent rect. 22 8
192 58.07 precipitation 0.1 90 < th dose independent rect. 4 4
193 58.07 precipitation 0.1 90 < th dose dependent rect. 4 4
204 58.12 temperature 30.0 90 < th dose dependent rect. 11 17
205 58.13 humidity 50.0 43200 > th dose independent rect. 24 4
206 58.13 wind 9.0 90 < th dose independent rect. 4 18
210 58.16 wind 9.0 90 < th dose independent rect. 8 20
213 58.19 wind 7.0 90 < th dose independent rect. 4 4
224 58.22 temperature 10.0 90 > th dose independent rect. 4 4
226 58.22 temperature 30.0 90 < th dose independent rect. 4 4
227 58.22 humidity 50.0 90 > th dose independent rect. 4 4
229 58.22 atmosphere 995.0 90 > th dose independent rect. 4 4
230 58.22 atmosphere 1015.0 90 < th dose independent rect. 4 4
231 58.22 temperature 10.0 90 > th dose independent rect. 8 20
232 58.22 temperature 10.0 90 > th dose dependent rect. 4 4
233 58.24 temperature 15.0 1440 > th dose independent rect. 16 8
234 58.25 radiation 1.0 30 < th dose independent sin 10 NA
235 58.25 atmosphere 1010.0 270 < th dose independent rect. 13 8
238 58.29 radiation 40.0 90 < th dose independent rect. 4 4
241 58.30 radiation 40.0 14400 < th dose dependent rect. 24 5
245 58.32 temperature 10.0 10 > th dose dependent rect. 5 3
247 58.32 temperature 30.0 10 < th dose dependent rect. 12 17
249 58.35 temperature 10.0 10 > th dose dependent rect. 16 16
261 58.43 wind 7.0 10 < th dose independent rect. 22 7
262 58.45 precipitation 0.1 10 < th dose independent rect. 5 17
263 58.45 precipitation 0.1 10 < th dose dependent rect. 5 17
264 58.46 temperature 10.0 10 > th dose dependent rect. 5 18
282 58.55 wind 9.0 270 < th dose independent rect. 6 21
297 58.61 temperature 10.0 10 > th dose independent rect. 22 7
298 58.61 temperature 30.0 10 < th dose independent rect. 22 7
299 58.61 humidity 50.0 10 > th dose independent rect. 22 7
302 58.61 atmosphere 995.0 10 > th dose independent rect. 22 7
308 58.61 temperature 10.0 10 > th dose independent rect. 5 17
310 58.61 atmosphere 1015.0 10 < th dose independent rect. 5 17
315 58.63 precipitation 0.1 270 < th dose independent rect. 2 6
316 58.63 radiation 40.0 90 < th dose independent rect. 4 18
317 58.63 precipitation 0.1 270 < th dose dependent rect. 2 6
319 58.63 temperature 10.0 90 > th dose dependent rect. 4 18
323 58.65 temperature 10.0 90 > th dose dependent rect. 16 16
332 58.68 wind 9.0 10 < th dose independent rect. 5 17
346 58.73 temperature 15.0 4320 > th dose independent rect. 6 3
369 58.78 temperature 20.0 270 > th dose independent rect. 13 8
370 58.78 atmosphere 995.0 90 > th dose independent rect. 4 18
398 58.79 precipitation 0.1 90 < th dose independent rect. 8 20
404 58.79 precipitation 0.1 90 < th dose dependent rect. 8 20
409 58.80 humidity 50.0 10 > th dose dependent rect. 22 7
411 58.82 radiation 30.0 90 < th dose independent rect. 4 7
434 58.88 wind 9.0 270 < th dose independent rect. 8 18
437 58.88 temperature 30.0 10 < th dose dependent rect. 10 19
439 58.91 temperature 20.0 30 > th dose independent rect. 16 16
450 58.94 atmosphere 1015.0 90 < th dose dependent rect. 4 4
455 58.96 radiation 1.0 4320 < th dose independent rect. 24 5
478 58.98 wind 9.0 270 < th dose dependent rect. 2 6
498 59.04 atmosphere 1010.0 270 < th dose independent rect. 15 16
517 59.05 radiation 40.0 270 < th dose dependent rect. 3 3
518 59.05 atmosphere 995.0 90 > th dose dependent rect. 22 6
523 59.06 precipitation 0.1 10 < th dose independent rect. 22 7
525 59.06 precipitation 0.1 10 < th dose dependent rect. 22 7
526 59.07 wind 7.0 270 < th dose independent rect. 2 6
532 59.08 atmosphere 1010.0 270 < th dose independent rect. 2 6
536 59.10 temperature 10.0 270 > th dose independent rect. 2 6
538 59.10 temperature 30.0 270 < th dose independent rect. 2 6
539 59.10 humidity 50.0 270 > th dose independent rect. 2 6
541 59.10 atmosphere 995.0 270 > th dose independent rect. 2 6
543 59.10 radiation 20.0 270 < th dose independent rect. 2 6
544 59.10 temperature 10.0 270 > th dose independent rect. 8 18
548 59.12 precipitation 0.1 270 < th dose independent rect. 6 21
552 59.12 precipitation 0.1 270 < th dose dependent rect. 6 21
571 59.14 precipitation 0.1 270 < th dose independent rect. 19 8
575 59.14 precipitation 0.1 270 < th dose dependent rect. 19 8
581 59.16 radiation 40.0 270 < th dose dependent rect. 2 7
584 59.16 humidity 50.0 90 > th dose dependent rect. 8 20
588 59.18 temperature 10.0 43200 > th dose independent rect. 9 7
595 59.19 atmosphere 1015.0 270 < th dose independent rect. 2 19
600 59.20 radiation 40.0 270 < th dose independent rect. 2 6
617 59.24 radiation 40.0 1440 < th dose dependent rect. 24 5
636 59.28 temperature 30.0 10 < th dose dependent rect. 8 21
647 59.30 radiation 1.0 270 < th dose dependent rect. 6 21
662 59.34 precipitation 0.1 270 < th dose independent rect. 8 18
663 59.34 precipitation 0.1 270 < th dose dependent rect. 8 18
690 59.37 radiation 40.0 10 < th dose independent rect. 5 18
774 59.43 atmosphere 995.0 90 > th dose independent rect. 8 20
794 59.47 atmosphere 1015.0 10 < th dose dependent rect. 5 3
796 59.47 humidity 50.0 10 > th dose dependent rect. 8 21
814 59.51 temperature 30.0 270 < th dose dependent rect. 21 4
818 59.52 atmosphere 995.0 10 > th dose independent rect. 5 17
819 59.52 humidity 50.0 270 > th dose dependent rect. 3 3
821 59.52 wind 9.0 90 < th dose dependent rect. 8 20
827 59.54 atmosphere 1015.0 270 < th dose dependent rect. 4 1
848 59.59 wind 1.0 90 > th dose independent rect. 23 16
892 59.64 atmosphere 995.0 10 > th dose dependent rect. 23 6
915 59.66 wind 9.0 270 < th dose dependent rect. 21 4
940 59.67 humidity 50.0 270 > th dose dependent rect. 21 4
966 59.72 wind 9.0 1440 < th dose independent rect. 5 4
970 59.72 humidity 50.0 1440 > th dose independent rect. 5 4
972 59.72 atmosphere 995.0 1440 > th dose independent rect. 5 4
973 59.72 atmosphere 1015.0 1440 < th dose independent rect. 5 4
974 59.72 temperature 10.0 1440 > th dose independent rect. 9 20
983 59.74 humidity 50.0 270 > th dose independent rect. 8 18
984 59.74 humidity 50.0 90 > th dose independent rect. 8 20
993 59.77 wind 9.0 270 < th dose independent rect. 2 18