Os09g0450300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MAP65/ASE1 family protein.
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Os09g0450300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MAP65/ASE1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 322.49 | 0.844 | 10.4 | -6.16 | 1.26 | 3.34 | 0.538 | -8.3 | -0.363 | 1.44 | 25.4 | 1267 | -- | -- |
| 336.08 | 0.854 | 10.3 | -4.35 | 1.53 | 2.47 | 0.516 | -- | -0.293 | 1.16 | 25 | 6932 | -- | -- |
| 323.57 | 0.838 | 10.4 | -6.14 | 1.25 | 3.34 | -- | -8.15 | -0.36 | 1.37 | 25.4 | 1263 | -- | -- |
| 334.33 | 0.852 | 10.2 | -4.22 | 1.45 | 2.39 | -- | -- | -0.176 | 1.28 | 24.98 | 6902 | -- | -- |
| 397.96 | 0.929 | 10.4 | -6.2 | -- | 3.94 | -- | -8.37 | -0.508 | -- | 24.52 | 1144 | -- | -- |
| 578.04 | 1.13 | 10.1 | -3.24 | 1.7 | -- | 0.693 | -- | 0.395 | 1.42 | -- | -- | -- | -- |
| 579.93 | 1.13 | 10.1 | -3.26 | 1.69 | -- | -- | -- | 0.391 | 1.35 | -- | -- | -- | -- |
| 426.09 | 0.961 | 10.2 | -4.13 | -- | 3.09 | -- | -- | 0.0703 | -- | 24.8 | 1144 | -- | -- |
| 744.21 | 1.27 | 10 | -- | 1.46 | 1.51 | -- | -- | 0.886 | 1.21 | 28.1 | 5508 | -- | -- |
| 756.74 | 1.29 | 10.1 | -3.19 | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
| 859.85 | 1.37 | 10 | -- | 1.64 | -- | -- | -- | 0.754 | 1.27 | -- | -- | -- | -- |
| 843.82 | 1.35 | 10 | -- | -- | 2.18 | -- | -- | 0.67 | -- | 25.39 | 1133 | -- | -- |
| 1025.59 | 1.49 | 10 | -- | -- | -- | -- | -- | 0.781 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 328.42 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 3 | 328.50 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 12 | 328.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 38 | 329.49 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 60 | 330.34 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 91 | 331.64 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 93 | 331.78 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 98 | 332.01 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 106 | 332.24 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 135 | 332.78 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 142 | 332.85 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 212 | 333.27 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 214 | 333.30 | wind | 3.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 220 | 333.33 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 268 | 334.97 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 294 | 335.72 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 301 | 335.92 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 305 | 336.04 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 309 | 336.32 | wind | 5.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 322 | 337.16 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 325 | 337.27 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 327 | 337.29 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 328 | 337.36 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 330 | 337.41 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 342 | 337.83 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 346 | 337.95 | wind | 5.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 351 | 338.16 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 388 | 339.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 390 | 339.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 403 | 339.60 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 409 | 339.93 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 427 | 340.55 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 434 | 340.65 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 446 | 340.99 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 479 | 341.64 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 490 | 341.91 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 509 | 342.19 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 516 | 342.31 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 540 | 342.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 548 | 342.67 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 591 | 343.22 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 600 | 343.32 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 603 | 343.33 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 628 | 343.72 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 644 | 344.05 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 651 | 344.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 658 | 344.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 661 | 344.23 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 682 | 344.58 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 723 | 345.22 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 724 | 345.23 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 726 | 345.29 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 727 | 345.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 22 |
| 728 | 345.31 | wind | 7.0 | 43200 | > th | dose independent | rect. | 24 | 22 |
| 730 | 345.32 | wind | 7.0 | 43200 | > th | dose independent | rect. | 2 | 20 |
| 745 | 345.48 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 3 | 19 |
| 746 | 345.49 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 759 | 345.56 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 763 | 345.61 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 774 | 345.72 | wind | 7.0 | 43200 | < th | dose independent | rect. | 2 | 20 |
| 777 | 345.74 | wind | 7.0 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 786 | 345.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 790 | 345.80 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 797 | 345.83 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 800 | 345.87 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 807 | 345.92 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 819 | 346.00 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 830 | 346.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 865 | 346.22 | wind | 7.0 | 43200 | > th | dose independent | no | NA | NA |
| 879 | 346.27 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 898 | 346.32 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 903 | 346.34 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 911 | 346.38 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 938 | 346.51 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 949 | 346.58 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 964 | 346.63 | wind | 7.0 | 43200 | < th | dose independent | no | NA | NA |
| 982 | 346.71 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |