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Os09g0449800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0395) R2 : 0.824
β1 : 1.77 (0.145) R2dD : 0.0584 R2D : 0.0149
β2 : 2.27 (0.103) R2dC : 0.187 R2C : 0.174
β3 : -4.34 (0.11) R2dE : 0.598 R2E : 0.549
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.685 (0.0843) R2dN8 : 0.0332 R2N8 : 0.00567
σ : 0.738
deviance : 251.05
__
_____
C
peak time of C : 6.67
E
wheather : temperature
threshold : 7.525
memory length : 285
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.7
open length of G : 7.79

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
232.91 0.717 10 1.83 2.14 -4.09 1.54 3.17 0.718 7.34 9.662 272 18.8 7.46
249.97 0.736 10.1 1.74 2.26 -4.08 1.75 -- 0.685 6.96 7.776 266 18.9 7.68
237.13 0.717 10 1.88 2.25 -4.42 -- 2.65 0.72 6.67 8.51 294 18.6 7.77
251.05 0.738 10.1 1.77 2.27 -4.34 -- -- 0.685 6.67 7.525 285 18.7 7.79
338.16 0.856 10.1 1.95 -- -4.54 -- 3.46 0.81 -- 6.556 237 17.5 8.52
418.26 0.959 10 1.58 3.9 -- -0.24 -- 0.613 10.5 -- -- -- --
418.5 0.958 10 1.57 3.9 -- -- -- 0.612 10.5 -- -- -- --
339.94 0.859 10.1 1.84 -- -4.58 -- -- 0.809 -- 6.087 245 17.4 8.5
323.93 0.838 10.1 -- 2.17 -4.01 -- -- 0.548 6.59 3.253 220 18.8 8.18
1353.6 1.72 10.1 1.5 -- -- -- -- 0.595 -- -- -- -- --
483.82 1.03 10.1 -- 3.89 -- -- -- 0.436 10.5 -- -- -- --
412.45 0.946 10.2 -- -- -4.29 -- -- 0.474 -- -2.476 247 17.3 8.42
1413.35 1.75 10.2 -- -- -- -- -- 0.428 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 236.85 temperature 10.0 270 > th dose dependent rect. 19 7
8 254.27 temperature 20.0 270 > th dose independent rect. 19 7
9 254.40 temperature 15.0 270 > th dose independent rect. 18 9
19 264.31 temperature 20.0 270 > th dose independent rect. 8 17
26 269.49 temperature 10.0 10 > th dose dependent rect. 20 9
41 275.72 precipitation 0.1 270 < th dose independent rect. 18 9
42 275.72 precipitation 0.1 270 < th dose dependent rect. 18 9
43 275.99 precipitation 0.1 270 < th dose independent rect. 3 15
44 275.99 precipitation 0.1 270 < th dose dependent rect. 3 15
45 276.07 radiation 10.0 270 < th dose independent rect. 18 9
47 276.23 humidity 50.0 270 > th dose independent rect. 18 9
51 276.23 temperature 10.0 270 > th dose independent rect. 3 15
52 276.23 atmosphere 1015.0 270 < th dose independent rect. 3 15
53 276.31 radiation 40.0 270 < th dose dependent rect. 18 9
57 276.47 temperature 15.0 10 > th dose independent rect. 20 9
60 276.91 temperature 15.0 270 > th dose independent rect. 19 18
61 276.96 wind 9.0 270 < th dose independent rect. 18 9
62 276.97 atmosphere 995.0 270 > th dose independent rect. 18 9
75 278.90 temperature 30.0 90 < th dose independent rect. 19 9
119 283.80 wind 9.0 270 < th dose independent rect. 3 15
124 284.44 atmosphere 1010.0 270 < th dose independent rect. 19 7
148 286.35 temperature 15.0 270 > th dose independent rect. 6 21
180 287.44 temperature 15.0 270 > th dose independent rect. 7 7
184 287.73 wind 9.0 270 < th dose independent rect. 7 7
189 288.39 atmosphere 995.0 90 > th dose independent rect. 4 15
198 289.44 radiation 40.0 90 < th dose dependent rect. 4 15
202 289.83 atmosphere 995.0 270 > th dose independent rect. 7 7
203 289.83 atmosphere 1015.0 270 < th dose independent rect. 7 7
204 289.83 temperature 10.0 270 > th dose independent rect. 14 17
206 289.97 radiation 40.0 90 < th dose independent rect. 4 15
207 290.17 precipitation 0.1 270 < th dose independent rect. 7 7
209 290.17 precipitation 0.1 270 < th dose dependent rect. 7 7
213 290.37 atmosphere 1010.0 10 < th dose independent rect. 20 9
221 291.00 radiation 40.0 270 < th dose independent rect. 14 17
273 292.57 wind 9.0 270 < th dose independent rect. 14 17
276 292.86 precipitation 0.1 270 < th dose independent rect. 14 17
277 292.86 precipitation 0.1 270 < th dose dependent rect. 14 17
282 293.13 wind 9.0 90 < th dose dependent rect. 19 9
295 294.27 radiation 1.0 270 > th dose independent rect. 7 7
310 295.92 radiation 1.0 10 < th dose dependent rect. 20 9
311 295.94 radiation 40.0 10 < th dose dependent rect. 5 15
315 296.26 atmosphere 995.0 270 > th dose independent rect. 14 17
329 297.18 radiation 1.0 90 < th dose dependent sin 12 NA
334 297.38 radiation 20.0 90 < th dose independent rect. 4 15
350 297.70 temperature 30.0 10 < th dose independent rect. 20 9
351 297.70 humidity 50.0 10 > th dose independent rect. 20 9
354 297.70 atmosphere 995.0 10 > th dose independent rect. 20 9
355 297.70 radiation 1.0 10 < th dose independent rect. 20 9
360 297.70 temperature 10.0 10 > th dose independent rect. 5 15
362 297.70 atmosphere 1015.0 10 < th dose independent rect. 5 15
364 297.74 wind 1.0 270 > th dose independent rect. 7 7
371 298.00 wind 9.0 10 < th dose independent rect. 20 9
375 298.28 wind 9.0 270 < th dose independent rect. 7 19
377 298.39 precipitation 0.1 10 < th dose independent rect. 20 9
378 298.39 precipitation 0.1 10 < th dose dependent rect. 20 9
383 298.69 precipitation 0.1 10 < th dose independent rect. 5 15
384 298.69 precipitation 0.1 10 < th dose dependent rect. 5 15
385 298.74 humidity 50.0 90 > th dose dependent rect. 19 9
387 298.77 wind 9.0 270 < th dose independent rect. 8 17
390 298.94 precipitation 0.1 270 < th dose independent rect. 2 5
391 298.94 precipitation 0.1 270 < th dose dependent rect. 2 5
394 299.05 radiation 20.0 270 < th dose independent rect. 2 6
401 299.24 radiation 40.0 270 < th dose independent rect. 2 16
402 299.28 humidity 70.0 270 > th dose independent rect. 1 7
403 299.36 precipitation 0.1 270 < th dose independent rect. 1 7
404 299.36 precipitation 0.1 270 < th dose dependent rect. 1 7
424 300.31 humidity 70.0 270 > th dose independent rect. 2 5
427 300.42 wind 7.0 270 < th dose independent rect. 2 5
430 300.55 wind 7.0 270 < th dose independent rect. 1 7
433 300.59 humidity 50.0 270 > th dose independent rect. 7 7
441 300.81 radiation 20.0 90 < th dose independent rect. 15 18
446 300.89 temperature 10.0 270 > th dose independent rect. 2 5
448 300.89 temperature 30.0 270 < th dose independent rect. 2 5
449 300.89 humidity 50.0 270 > th dose independent rect. 2 5
451 300.89 atmosphere 995.0 270 > th dose independent rect. 2 5
452 300.89 atmosphere 1015.0 270 < th dose independent rect. 2 5
455 300.90 radiation 40.0 270 < th dose dependent rect. 2 6
457 301.10 radiation 1.0 10 < th dose dependent rect. 20 18
471 301.37 temperature 10.0 270 > th dose independent rect. 1 7
473 301.37 temperature 30.0 270 < th dose independent rect. 1 7
474 301.37 humidity 50.0 270 > th dose independent rect. 1 7
476 301.37 atmosphere 995.0 270 > th dose independent rect. 1 7
477 301.37 atmosphere 1015.0 270 < th dose independent rect. 1 7
482 301.45 precipitation 0.1 270 < th dose independent rect. 7 19
483 301.45 precipitation 0.1 270 < th dose dependent rect. 7 19
490 301.75 wind 9.0 270 < th dose dependent rect. 2 5
495 301.92 precipitation 0.1 270 < th dose independent rect. 8 17
496 301.92 precipitation 0.1 270 < th dose dependent rect. 8 17
520 302.28 temperature 10.0 270 > th dose dependent rect. 19 18
525 302.47 radiation 1.0 10 < th dose dependent rect. 20 16
558 303.46 radiation 1.0 10 < th dose dependent rect. 20 12
602 304.35 wind 9.0 270 < th dose independent rect. 6 21
620 304.61 temperature 10.0 270 > th dose dependent rect. 2 5
631 305.05 atmosphere 995.0 10 > th dose independent rect. 5 15
638 305.32 precipitation 0.1 270 < th dose independent rect. 3 3
639 305.32 precipitation 0.1 270 < th dose dependent rect. 3 3
642 305.36 humidity 50.0 270 > th dose dependent rect. 2 5
655 305.78 wind 9.0 10 < th dose independent rect. 5 15
656 305.79 radiation 40.0 90 < th dose dependent rect. 15 18
659 305.86 radiation 40.0 270 < th dose independent rect. 13 6
660 305.87 wind 9.0 270 < th dose independent rect. 19 19
676 306.24 radiation 10.0 270 < th dose independent rect. 3 3
687 306.51 atmosphere 1015.0 10 < th dose dependent rect. 20 9
702 306.69 radiation 1.0 90 < th dose independent sin 12 NA
721 306.99 wind 9.0 270 < th dose independent rect. 21 16
728 307.05 temperature 10.0 270 > th dose independent rect. 13 6
730 307.05 atmosphere 1010.0 270 < th dose independent rect. 13 6
733 307.05 atmosphere 995.0 270 > th dose independent rect. 19 18
735 307.16 wind 7.0 270 < th dose independent rect. 3 3
739 307.23 precipitation 0.1 270 < th dose independent rect. 19 18
740 307.23 precipitation 0.1 270 < th dose dependent rect. 19 18
785 307.53 wind 9.0 10 < th dose dependent rect. 20 8
787 307.54 temperature 10.0 270 > th dose independent rect. 3 3
789 307.54 temperature 30.0 270 < th dose independent rect. 3 3
790 307.54 humidity 50.0 270 > th dose independent rect. 3 3
793 307.54 atmosphere 995.0 270 > th dose independent rect. 3 3
794 307.54 atmosphere 1015.0 270 < th dose independent rect. 3 3
804 307.69 wind 1.0 270 > th dose independent rect. 14 5
825 308.12 wind 1.0 270 > th dose independent rect. 18 8
833 308.18 temperature 10.0 270 > th dose dependent rect. 3 3
840 308.25 precipitation 0.1 270 < th dose independent rect. 13 6
843 308.25 precipitation 0.1 270 < th dose dependent rect. 13 6
885 308.55 temperature 10.0 270 > th dose independent rect. 13 8
887 308.55 atmosphere 995.0 270 > th dose independent rect. 21 16
892 308.63 temperature 15.0 10 > th dose independent rect. 20 21
910 308.80 precipitation 0.1 270 < th dose independent rect. 6 21
911 308.80 precipitation 0.1 270 < th dose dependent rect. 6 21
954 309.24 radiation 1.0 10 < th dose independent rect. 20 18
970 309.59 radiation 1.0 10 < th dose dependent sin 10 NA
973 309.63 wind 9.0 270 < th dose independent rect. 14 5