Os09g0449500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0449500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.98 | 0.348 | 3.22 | -0.0125 | 0.0587 | 2.02 | -0.146 | -7.06 | -0.00965 | 7.18 | 94.1 | 208 | 12.7 | -- |
| 69.79 | 0.389 | 3.23 | -0.1 | 0.0378 | 2.07 | -0.799 | -- | -0.0547 | 3.87 | 94.84 | 224 | 13.1 | -- |
| 54.41 | 0.344 | 3.22 | -0.0117 | 0.0658 | 2.15 | -- | -7.25 | -0.0116 | 7.24 | 94.19 | 219 | 13.2 | -- |
| 71 | 0.392 | 3.21 | -0.074 | 0.0276 | 2.22 | -- | -- | -0.0185 | 6.48 | 94.86 | 219 | 13.1 | -- |
| 54.63 | 0.344 | 3.22 | -0.00742 | -- | 2.16 | -- | -7.16 | -0.00755 | -- | 94.27 | 219 | 13.2 | -- |
| 85.82 | 0.434 | 3.22 | -0.0673 | 0.154 | -- | -0.854 | -- | -0.0832 | 4.12 | -- | -- | -- | -- |
| 87.84 | 0.439 | 3.22 | -0.0574 | 0.153 | -- | -- | -- | -0.0785 | 4.81 | -- | -- | -- | -- |
| 71.1 | 0.393 | 3.21 | -0.0734 | -- | 2.34 | -- | -- | -0.0156 | -- | 94.88 | 219 | 13.1 | -- |
| 71.04 | 0.393 | 3.21 | -- | 0.0497 | 2.34 | -- | -- | -0.0156 | 8.45 | 94.88 | 219 | 13.1 | -- |
| 89.09 | 0.441 | 3.22 | -0.0517 | -- | -- | -- | -- | -0.0746 | -- | -- | -- | -- | -- |
| 87.93 | 0.439 | 3.22 | -- | 0.152 | -- | -- | -- | -0.0721 | 4.82 | -- | -- | -- | -- |
| 71.23 | 0.393 | 3.21 | -- | -- | 2.35 | -- | -- | -0.0123 | -- | 94.88 | 219 | 13.1 | -- |
| 89.16 | 0.441 | 3.22 | -- | -- | -- | -- | -- | -0.0688 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.18 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 68.78 | wind | 1 | 270 | < th | dose independent | rect. | 23 | 2 |
| 7 | 71.44 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 8 | 71.44 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 73.00 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 23 | 2 |
| 13 | 73.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 14 | 73.44 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 16 | 73.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 17 | 73.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 18 | 73.48 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 20 | 73.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 22 | 73.51 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 24 | 73.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 32 | 73.63 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 22 | 4 |
| 40 | 73.71 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 75 | 74.07 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 76 | 74.13 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 80 | 74.27 | humidity | 90 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 96 | 74.84 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 103 | 74.94 | wind | 1 | 90 | < th | dose independent | rect. | 13 | 13 |
| 107 | 74.99 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 11 |
| 138 | 75.27 | humidity | 90 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 161 | 75.59 | wind | 1 | 90 | < th | dose independent | rect. | 9 | 17 |
| 170 | 75.71 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 192 | 76.28 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 200 | 76.34 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 230 | 76.70 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 238 | 76.79 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 243 | 76.83 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 253 | 76.83 | radiation | 1 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 267 | 76.90 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 3 |
| 271 | 76.93 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 281 | 77.04 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 283 | 77.04 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 285 | 77.04 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 336 | 77.04 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 338 | 77.04 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 340 | 77.04 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 405 | 77.28 | humidity | 90 | 270 | > th | dose dependent | sin | 16 | NA |
| 412 | 77.34 | wind | 1 | 90 | > th | dose independent | sin | 17 | NA |
| 440 | 77.61 | wind | 1 | 90 | < th | dose dependent | rect. | 13 | 13 |
| 443 | 77.66 | wind | 1 | 90 | < th | dose dependent | rect. | 15 | 11 |
| 465 | 77.83 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 20 | 4 |
| 490 | 77.97 | wind | 1 | 90 | < th | dose independent | sin | 17 | NA |
| 505 | 78.11 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 3 |
| 533 | 78.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 577 | 78.43 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 585 | 78.50 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 13 |
| 589 | 78.51 | radiation | 10 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 600 | 78.56 | wind | 1 | 90 | < th | dose dependent | rect. | 9 | 17 |
| 612 | 78.63 | humidity | 90 | 90 | > th | dose independent | rect. | 1 | 2 |
| 641 | 78.77 | wind | 1 | 10 | < th | dose independent | rect. | 2 | 3 |
| 645 | 78.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 646 | 78.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 647 | 78.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 661 | 78.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 662 | 78.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 688 | 78.86 | radiation | 1 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 697 | 78.88 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 711 | 78.92 | radiation | 10 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 713 | 78.92 | radiation | 10 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 800 | 79.02 | wind | 1 | 90 | > th | dose independent | rect. | 3 | 23 |
| 825 | 79.10 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 875 | 79.25 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 904 | 79.29 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 23 | 5 |
| 963 | 79.44 | radiation | 1 | 1440 | < th | dose dependent | sin | 20 | NA |
| 978 | 79.46 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 5 | 2 |