Os09g0448900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0448900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.34 | 0.283 | 9.35 | -0.0113 | 1.62 | 1.4 | -0.505 | -0.128 | -0.127 | 15.2 | 24.2 | 269 | -- | -- |
| 36.34 | 0.281 | 9.35 | -0.0322 | 1.63 | 1.41 | -0.482 | -- | -0.13 | 15.2 | 24.1 | 280 | -- | -- |
| 37.05 | 0.283 | 9.35 | -0.0607 | 1.62 | 1.39 | -- | 0.0959 | -0.136 | 15.2 | 24.08 | 281 | -- | -- |
| 37.01 | 0.283 | 9.35 | -0.0416 | 1.6 | 1.41 | -- | -- | -0.133 | 15.3 | 24.1 | 309 | -- | -- |
| 147.08 | 0.565 | 9.31 | 0.381 | -- | 1.38 | -- | -1.11 | -0.0991 | -- | 34.51 | 2580 | -- | -- |
| 63.88 | 0.375 | 9.41 | -0.384 | 1.47 | -- | -0.419 | -- | -0.378 | 15.2 | -- | -- | -- | -- |
| 64.45 | 0.376 | 9.41 | -0.393 | 1.47 | -- | -- | -- | -0.381 | 15.2 | -- | -- | -- | -- |
| 139.79 | 0.551 | 9.34 | 0.0766 | -- | 1.69 | -- | -- | -0.104 | -- | 32.73 | 1135 | -- | -- |
| 37.05 | 0.283 | 9.35 | -- | 1.61 | 1.43 | -- | -- | -0.124 | 15.3 | 24.1 | 309 | -- | -- |
| 187.35 | 0.64 | 9.41 | -0.456 | -- | -- | -- | -- | -0.419 | -- | -- | -- | -- | -- |
| 68.52 | 0.387 | 9.4 | -- | 1.48 | -- | -- | -- | -0.337 | 15.2 | -- | -- | -- | -- |
| 139.77 | 0.551 | 9.35 | -- | -- | 1.66 | -- | -- | -0.132 | -- | 40.72 | 1133 | -- | -- |
| 192.83 | 0.648 | 9.4 | -- | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 15 |
| 5 | 34.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 6 | 34.98 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 12 | 35.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 17 | 35.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 25 | 35.36 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 22 |
| 38 | 35.61 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 69 | 36.11 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 72 | 36.15 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 91 | 36.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 100 | 36.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 106 | 36.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 7 |
| 125 | 36.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 151 | 36.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 158 | 36.81 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 173 | 36.90 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 294 | 37.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 519 | 38.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 682 | 38.79 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 696 | 38.84 | temperature | 25 | 270 | < th | dose dependent | sin | 9 | NA |
| 718 | 38.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 903 | 39.47 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 933 | 39.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 9 |