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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0447900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.14 (0.0168) R2 : 2.08e-06
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00109 (0.0354) R2dN8 : 2.69e-06 R2N8 : 2.08e-06
σ : 0.317
deviance : 46.02
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.31 0.309 3.14 0.139 0.144 -0.124 -0.143 -0.803 -0.00497 7.14 71.36 5869 -- --
43.67 0.308 3.15 0.128 0.143 -0.211 -0.0567 -- -0.0742 7.63 85 7291 -- --
43.33 0.307 3.15 0.156 0.155 -0.114 -- -0.792 -0.00717 7.25 73.98 6339 -- --
43.66 0.308 3.16 0.114 0.147 -0.233 -- -- -0.0951 7.24 85.98 7293 -- --
44.43 0.31 3.15 0.189 -- -0.146 -- -0.81 -0.0229 -- 77.76 5776 -- --
44.71 0.313 3.14 0.0777 0.144 -- -0.159 -- 0.00451 7.01 -- -- -- --
44.77 0.313 3.14 0.0751 0.143 -- -- -- 0.00511 7.31 -- -- -- --
44.76 0.312 3.16 0.12 -- -0.234 -- -- -0.0953 -- 85.81 7203 -- --
44.01 0.309 3.16 -- 0.144 -0.211 -- -- -0.0964 7.21 85.68 7294 -- --
45.86 0.316 3.14 0.0775 -- -- -- -- 0.00751 -- -- -- -- --
44.92 0.314 3.14 -- 0.144 -- -- -- -0.00325 7.27 -- -- -- --
45.12 0.313 3.16 -- -- -0.207 -- -- -0.0958 -- 85.43 7224 -- --
46.02 0.317 3.14 -- -- -- -- -- -0.00109 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.81 humidity 90.0 10 < th dose independent rect. 3 2
2 40.83 humidity 90.0 10 < th dose dependent rect. 4 1
6 41.29 atmosphere 1005.0 10 > th dose dependent rect. 4 1
10 41.43 temperature 25.0 90 > th dose independent rect. 2 3
11 41.45 temperature 30.0 30 < th dose dependent rect. 4 1
13 41.47 atmosphere 1005.0 10 > th dose independent rect. 4 1
14 41.48 wind 3.0 10 < th dose independent rect. 4 1
18 41.52 wind 9.0 10 < th dose dependent rect. 4 1
19 41.53 precipitation 0.1 10 < th dose independent rect. 4 1
22 41.53 precipitation 0.1 10 < th dose dependent rect. 4 1
24 41.54 temperature 10.0 10 > th dose independent rect. 4 1
26 41.54 temperature 30.0 10 < th dose independent rect. 4 1
27 41.54 humidity 50.0 10 > th dose independent rect. 4 1
31 41.54 atmosphere 995.0 10 > th dose independent rect. 4 1
32 41.54 atmosphere 1010.0 10 < th dose independent rect. 4 1
34 41.54 radiation 1.0 10 < th dose independent rect. 4 1
39 41.54 temperature 10.0 10 > th dose independent rect. 5 23
40 41.54 radiation 1.0 10 < th dose dependent rect. 4 1
48 41.56 atmosphere 1005.0 30 > th dose dependent rect. 2 3
82 41.60 temperature 25.0 90 > th dose dependent rect. 2 3
84 41.61 humidity 50.0 30 > th dose dependent rect. 4 1
87 41.63 wind 1.0 30 > th dose independent rect. 4 1
88 41.63 atmosphere 1015.0 30 < th dose dependent rect. 4 1
93 41.65 temperature 10.0 30 > th dose dependent rect. 4 1
99 41.68 wind 7.0 1440 < th dose independent rect. 5 1
101 41.68 temperature 10.0 1440 > th dose independent rect. 5 1
104 41.68 temperature 30.0 1440 < th dose independent rect. 5 1
108 41.68 humidity 50.0 1440 > th dose independent rect. 5 1
117 41.68 atmosphere 995.0 1440 > th dose independent rect. 5 1
118 41.68 atmosphere 1015.0 1440 < th dose independent rect. 5 1
119 41.68 radiation 20.0 1440 < th dose independent rect. 5 1
128 41.68 temperature 10.0 1440 > th dose independent rect. 6 23
150 41.86 wind 1.0 30 > th dose dependent rect. 4 1
186 42.08 atmosphere 1000.0 30 > th dose independent rect. 5 23
187 42.10 wind 9.0 30 < th dose independent rect. 5 23
189 42.10 precipitation 0.1 30 < th dose independent rect. 5 23
190 42.10 precipitation 0.1 30 < th dose dependent rect. 5 23
221 42.42 atmosphere 995.0 30 > th dose independent rect. 21 23
228 42.49 humidity 80.0 14400 < th dose dependent rect. 2 7
248 42.61 humidity 80.0 14400 < th dose dependent rect. 21 13
255 42.68 wind 9.0 1440 < th dose independent rect. 21 1
257 42.69 atmosphere 1000.0 720 > th dose independent rect. 21 14
260 42.70 radiation 20.0 43200 < th dose dependent rect. 21 1
264 42.71 radiation 20.0 4320 < th dose dependent rect. 21 1
271 42.72 wind 3.0 30 > th dose independent rect. 20 1
272 42.72 temperature 25.0 30 > th dose independent rect. 20 1
273 42.72 temperature 10.0 1440 > th dose independent rect. 21 1
276 42.72 temperature 30.0 1440 < th dose independent rect. 21 1
280 42.72 humidity 50.0 1440 > th dose independent rect. 21 1
286 42.72 atmosphere 995.0 1440 > th dose independent rect. 21 1
287 42.72 radiation 1.0 1440 < th dose independent rect. 21 1
307 42.72 temperature 10.0 1440 > th dose independent rect. 22 23
312 42.73 temperature 25.0 30 > th dose dependent rect. 20 1
318 42.75 atmosphere 1000.0 30 > th dose independent rect. 5 21
321 42.76 humidity 80.0 30 > th dose independent rect. 20 1
325 42.77 atmosphere 1005.0 30 > th dose dependent rect. 20 1
335 42.79 humidity 90.0 30 < th dose independent rect. 20 1
337 42.79 wind 1.0 30 > th dose dependent rect. 20 1
345 42.82 wind 5.0 30 < th dose independent rect. 20 1
348 42.82 temperature 10.0 30 > th dose independent rect. 20 1
350 42.82 temperature 30.0 30 < th dose independent rect. 20 1
351 42.82 humidity 50.0 30 > th dose independent rect. 20 1
354 42.82 atmosphere 995.0 30 > th dose independent rect. 20 1
355 42.82 atmosphere 1005.0 30 > th dose independent rect. 20 1
356 42.82 atmosphere 1010.0 30 < th dose independent rect. 20 1
358 42.82 radiation 1.0 30 < th dose independent rect. 20 1
363 42.82 precipitation 0.1 30 < th dose independent rect. 20 1
365 42.82 temperature 10.0 30 > th dose independent rect. 21 23
366 42.82 humidity 50.0 30 > th dose dependent rect. 20 1
369 42.82 radiation 1.0 30 < th dose dependent rect. 20 1
375 42.82 precipitation 0.1 30 < th dose dependent rect. 20 1
377 42.83 wind 9.0 30 < th dose independent rect. 21 23
385 42.85 wind 9.0 30 < th dose dependent rect. 20 1
388 42.87 atmosphere 1000.0 720 > th dose independent rect. 23 10
390 42.88 atmosphere 1015.0 30 < th dose dependent rect. 20 1
393 42.89 temperature 25.0 720 > th dose dependent rect. 6 2
398 42.91 humidity 70.0 14400 < th dose independent rect. 8 2
399 42.91 humidity 70.0 14400 > th dose independent rect. 7 3
411 42.91 humidity 90.0 30 < th dose dependent rect. 20 1
438 42.95 atmosphere 1000.0 720 > th dose independent rect. 21 12
444 42.97 wind 3.0 14400 > th dose independent rect. 10 2
445 42.97 temperature 30.0 30 < th dose dependent rect. 20 1
451 42.98 temperature 30.0 270 < th dose independent rect. 10 11
452 42.98 wind 5.0 14400 < th dose dependent rect. 11 1
462 42.99 radiation 1.0 10 < th dose dependent rect. 4 10
467 43.01 wind 3.0 30 < th dose independent rect. 2 3
471 43.02 wind 1.0 30 > th dose independent rect. 2 3
479 43.04 radiation 1.0 10 < th dose independent rect. 4 10
482 43.05 wind 3.0 14400 < th dose independent rect. 10 2
503 43.08 radiation 1.0 90 < th dose dependent rect. 1 23
547 43.12 temperature 30.0 720 < th dose independent rect. 17 20
551 43.13 wind 3.0 14400 > th dose independent rect. 19 1
554 43.13 atmosphere 1000.0 30 < th dose independent rect. 7 20
555 43.13 humidity 50.0 30 > th dose independent rect. 5 23
561 43.14 atmosphere 1000.0 270 > th dose independent rect. 14 11
566 43.14 wind 1.0 14400 > th dose dependent rect. 11 1
571 43.14 atmosphere 995.0 30 > th dose dependent rect. 5 14
575 43.15 atmosphere 1000.0 720 > th dose independent rect. 5 4
576 43.15 temperature 30.0 270 < th dose independent rect. 1 13
581 43.15 humidity 80.0 14400 < th dose dependent sin 8 NA
582 43.15 wind 1.0 14400 < th dose dependent rect. 6 1
600 43.17 wind 1.0 14400 < th dose dependent rect. 2 1
629 43.18 atmosphere 1000.0 30 > th dose independent rect. 10 23
644 43.19 radiation 1.0 30 < th dose dependent rect. 2 14
647 43.20 atmosphere 1000.0 720 > th dose independent rect. 5 6
651 43.20 atmosphere 1000.0 270 > th dose independent rect. 3 23
662 43.21 radiation 1.0 10 < th dose independent rect. 2 12
665 43.21 atmosphere 1000.0 90 > th dose independent rect. 11 18
667 43.22 temperature 25.0 1440 < th dose independent rect. 1 1
669 43.22 wind 1.0 14400 < th dose independent rect. 4 3
670 43.22 atmosphere 1000.0 720 > th dose independent rect. 21 5
671 43.22 atmosphere 1000.0 270 > th dose independent rect. 5 12
674 43.22 wind 3.0 14400 > th dose dependent rect. 10 5
677 43.22 radiation 1.0 30 < th dose dependent rect. 2 12
680 43.23 wind 3.0 14400 < th dose independent rect. 19 1
694 43.24 wind 5.0 14400 < th dose independent rect. 10 7
697 43.24 wind 9.0 14400 > th dose dependent rect. 13 1
711 43.25 temperature 30.0 720 < th dose independent rect. 2 19
717 43.25 radiation 1.0 10 < th dose dependent rect. 4 4
726 43.26 wind 9.0 1440 < th dose independent rect. 3 3
727 43.26 temperature 10.0 1440 > th dose independent rect. 3 3
730 43.26 temperature 30.0 1440 < th dose independent rect. 3 3
734 43.26 humidity 50.0 1440 > th dose independent rect. 3 3
744 43.26 atmosphere 995.0 1440 > th dose independent rect. 3 3
745 43.26 radiation 20.0 1440 < th dose independent rect. 3 3
757 43.26 temperature 10.0 1440 > th dose independent rect. 6 21
763 43.26 wind 1.0 14400 < th dose dependent rect. 4 3
771 43.27 wind 1.0 14400 > th dose independent rect. 4 3
772 43.27 temperature 25.0 720 > th dose independent rect. 5 4
774 43.27 wind 5.0 14400 > th dose independent rect. 10 7
788 43.27 humidity 50.0 14400 > th dose dependent rect. 8 1
797 43.28 humidity 60.0 14400 < th dose independent rect. 11 1
811 43.28 humidity 80.0 4320 > th dose dependent rect. 6 3
817 43.28 atmosphere 995.0 30 > th dose dependent rect. 5 21
835 43.29 radiation 1.0 10 < th dose independent rect. 4 4
837 43.29 temperature 30.0 4320 < th dose independent rect. 3 6
841 43.29 temperature 30.0 1440 < th dose independent rect. 15 20
885 43.30 atmosphere 1000.0 10 > th dose independent rect. 14 12
887 43.30 atmosphere 1000.0 90 > th dose independent rect. 5 14
888 43.30 temperature 30.0 1440 > th dose independent rect. 15 20
889 43.30 temperature 30.0 270 < th dose independent rect. 9 20
890 43.30 atmosphere 1000.0 270 > th dose independent rect. 9 20
895 43.30 radiation 1.0 90 < th dose independent rect. 1 23
903 43.30 atmosphere 1000.0 10 < th dose dependent rect. 7 20
905 43.31 humidity 70.0 4320 > th dose independent rect. 10 1
916 43.31 atmosphere 995.0 720 > th dose independent rect. 5 20
941 43.32 humidity 80.0 14400 < th dose independent rect. 23 15
963 43.32 radiation 1.0 90 < th dose dependent rect. 6 23
972 43.33 temperature 30.0 720 < th dose independent rect. 9 5
977 43.33 wind 9.0 30 < th dose independent rect. 5 21
980 43.33 temperature 30.0 30 < th dose independent rect. 5 23
993 43.33 temperature 25.0 30 > th dose dependent rect. 16 19
998 43.33 radiation 1.0 30 < th dose dependent rect. 19 23