Os09g0447300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : E-class P450, group I family protein.
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Os09g0447300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : E-class P450, group I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 500 | 1.05 | 3.54 | 2.99 | 2.36 | -2.74 | 2.88 | 1.38 | 0.296 | 0.302 | 25.89 | 1146 | -- | -- |
| 501.22 | 1.04 | 3.56 | 2.8 | 2.39 | -2.64 | 3.05 | -- | 0.3 | 0.215 | 25.8 | 1135 | -- | -- |
| 532.83 | 1.08 | 3.48 | 3.36 | 2.34 | -2.85 | -- | 3.52 | 0.428 | 0.566 | 25.67 | 1168 | -- | -- |
| 535.7 | 1.08 | 3.58 | 2.58 | 2.24 | -2.38 | -- | -- | 0.211 | 0.653 | 26.09 | 1230 | -- | -- |
| 783.95 | 1.3 | 3.42 | 3.49 | -- | -2.62 | -- | 3.64 | 0.483 | -- | 25.7 | 1615 | -- | -- |
| 734.24 | 1.27 | 3.61 | 1.9 | 1.82 | -- | 2.35 | -- | 0.0696 | 0.289 | -- | -- | -- | -- |
| 757 | 1.29 | 3.61 | 1.8 | 1.82 | -- | -- | -- | 0.0552 | 0.589 | -- | -- | -- | -- |
| 782.45 | 1.3 | 3.53 | 2.59 | -- | -2.25 | -- | -- | 0.284 | -- | 25.6 | 1618 | -- | -- |
| 689.87 | 1.22 | 3.7 | -- | 2.17 | -1.83 | -- | -- | -0.314 | 0.695 | 27.98 | 1205 | -- | -- |
| 965.2 | 1.45 | 3.58 | 1.87 | -- | -- | -- | -- | 0.0866 | -- | -- | -- | -- | -- |
| 842.54 | 1.36 | 3.66 | -- | 1.85 | -- | -- | -- | -0.145 | 0.636 | -- | -- | -- | -- |
| 944.46 | 1.43 | 3.63 | -- | -- | -1.73 | -- | -- | -0.124 | -- | 26.6 | 1633 | -- | -- |
| 1057.01 | 1.52 | 3.62 | -- | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 486.37 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 3 | 490.35 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 5 | 492.01 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 45 | 508.45 | temperature | 25 | 720 | > th | dose dependent | sin | 14 | NA |
| 47 | 508.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 49 | 508.75 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 51 | 508.87 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 53 | 508.91 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 73 | 510.37 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 92 | 513.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 95 | 513.23 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 14 |
| 97 | 513.37 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 117 | 514.19 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 182 | 517.39 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 207 | 518.04 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 7 |
| 222 | 518.41 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 239 | 518.98 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 7 |
| 397 | 521.25 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 434 | 522.17 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 9 |
| 462 | 522.89 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 9 |
| 477 | 523.29 | radiation | 1 | 720 | < th | dose dependent | rect. | 12 | 13 |
| 491 | 523.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 519 | 524.68 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 4 |
| 528 | 524.88 | temperature | 30 | 1440 | > th | dose independent | sin | 15 | NA |
| 540 | 525.15 | temperature | 30 | 1440 | < th | dose independent | sin | 15 | NA |
| 555 | 525.59 | radiation | 1 | 720 | < th | dose dependent | sin | 17 | NA |
| 557 | 525.65 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 17 |
| 561 | 525.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 567 | 525.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 576 | 525.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 580 | 525.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 593 | 525.98 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 616 | 526.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 632 | 526.31 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 660 | 526.50 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 798 | 527.80 | humidity | 90 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 803 | 527.86 | radiation | 10 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 875 | 528.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 894 | 528.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 915 | 528.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 932 | 528.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 942 | 528.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 951 | 528.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 20 |
| 959 | 528.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 968 | 528.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 984 | 528.76 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |