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Os09g0442100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.31 (0.0498) R2 : 0.82
β1 : -0.953 (0.183) R2dD : 0.0107 R2D : 0.00398
β2 : 6.68 (0.148) R2dC : 1.28 R2C : 0.443
β3 : 4.47 (0.183) R2dE : 0.378 R2E : -0.472
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0539 (0.107) R2dN8 : 0.000193 R2N8 : -0.00307
σ : 0.929
deviance : 398.03
__
_____
C
peak time of C : 12.6
E
wheather : temperature
threshold : 5.681
memory length : 202
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.9
open length of G : 17.4

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
385.47 0.922 7.31 -1 6.35 4.54 -2.45 -0.973 -0.0701 12.6 7.597 228 11.4 18.1
382.47 0.911 7.29 -0.81 6.62 4.67 -2.24 -- -0.05 12.5 6.601 209 11.7 17.6
395.42 0.926 7.29 -0.697 6.6 4.43 -- 1.56 -0.0111 12.6 5.297 201 11.8 17.6
398.03 0.929 7.31 -0.953 6.68 4.47 -- -- -0.0539 12.6 5.681 202 11.9 17.4
1467.2 1.79 7.46 -2.15 -- 6.17 -- -10.3 -0.0139 -- 24.92 12 11.9 18.9
676.26 1.22 7.27 -0.324 4.99 -- -2.72 -- 0.397 14.1 -- -- -- --
704.09 1.24 7.28 -0.403 4.98 -- -- -- 0.381 14.1 -- -- -- --
1491.01 1.8 7.38 -1.27 -- 5.82 -- -- 0.0452 -- 24.7 24 11.7 18.7
420.16 0.955 7.29 -- 6.73 4.4 -- -- -0.0052 12.6 5.553 195 12 17.3
2188.43 2.19 7.33 -0.612 -- -- -- -- 0.262 -- -- -- -- --
708.37 1.25 7.27 -- 4.99 -- -- -- 0.426 14.1 -- -- -- --
1531.88 1.82 7.36 -- -- 5.64 -- -- 0.133 -- 24.7 24 11.7 19
2198.3 2.19 7.31 -- -- -- -- -- 0.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 397.50 temperature 10.0 270 > th dose dependent rect. 11 18
2 405.38 temperature 10.0 270 > th dose dependent rect. 11 6
5 412.62 radiation 1.0 270 > th dose independent rect. 11 6
7 413.71 temperature 10.0 270 > th dose dependent rect. 12 4
17 419.33 radiation 1.0 90 > th dose independent sin 16 NA
19 420.17 radiation 1.0 90 < th dose independent sin 16 NA
20 420.55 radiation 1.0 90 > th dose independent rect. 13 6
31 420.95 wind 9.0 270 < th dose independent rect. 17 18
34 421.19 precipitation 0.1 270 < th dose independent rect. 11 6
35 421.19 precipitation 0.1 270 < th dose dependent rect. 11 6
36 421.52 radiation 1.0 30 < th dose dependent sin 15 NA
37 421.99 temperature 20.0 270 > th dose independent rect. 11 6
39 422.55 humidity 50.0 270 > th dose independent rect. 17 18
54 423.38 temperature 10.0 270 > th dose independent rect. 11 6
55 423.38 atmosphere 1015.0 270 < th dose independent rect. 11 6
56 423.38 temperature 10.0 270 > th dose independent rect. 17 18
58 423.90 humidity 90.0 270 < th dose independent rect. 11 6
62 424.94 humidity 50.0 270 > th dose dependent rect. 21 9
71 426.56 wind 9.0 270 < th dose independent rect. 11 6
72 426.67 temperature 20.0 270 > th dose independent rect. 12 17
74 427.37 precipitation 0.1 270 < th dose independent rect. 17 18
75 427.37 precipitation 0.1 270 < th dose dependent rect. 17 18
81 428.35 temperature 10.0 270 > th dose dependent rect. 13 2
82 428.36 atmosphere 995.0 270 > th dose independent rect. 17 18
84 428.75 wind 1.0 270 > th dose independent rect. 11 6
86 429.21 wind 1.0 90 > th dose independent rect. 18 18
87 429.21 temperature 10.0 270 > th dose dependent rect. 24 16
91 429.63 wind 1.0 270 > th dose independent rect. 4 8
92 429.86 temperature 20.0 270 > th dose independent rect. 12 4
114 432.80 wind 9.0 270 < th dose independent rect. 5 7
115 432.84 precipitation 0.1 270 < th dose independent rect. 5 7
116 432.84 precipitation 0.1 270 < th dose dependent rect. 5 7
120 432.94 temperature 10.0 270 > th dose independent rect. 5 7
121 432.94 atmosphere 995.0 270 > th dose independent rect. 5 7
122 432.94 atmosphere 1015.0 270 < th dose independent rect. 5 7
123 432.94 temperature 10.0 270 > th dose independent rect. 12 17
132 434.22 precipitation 0.1 270 < th dose independent rect. 12 17
133 434.22 precipitation 0.1 270 < th dose dependent rect. 12 17
136 436.11 wind 9.0 270 < th dose independent rect. 16 20
141 437.15 temperature 10.0 10 > th dose dependent rect. 13 17
144 437.36 wind 9.0 270 < th dose independent rect. 12 17
148 437.74 radiation 20.0 270 < th dose independent rect. 16 9
151 438.09 precipitation 0.1 270 < th dose independent rect. 12 4
152 438.09 precipitation 0.1 270 < th dose dependent rect. 12 4
157 438.33 atmosphere 1010.0 270 < th dose independent rect. 12 4
161 438.94 temperature 10.0 270 > th dose independent rect. 12 4
164 438.94 temperature 10.0 270 > th dose independent rect. 16 20
178 439.29 temperature 20.0 270 > th dose independent rect. 13 2
182 439.54 radiation 1.0 90 < th dose independent rect. 17 10
184 439.64 temperature 10.0 270 > th dose dependent rect. 22 8
188 439.85 wind 9.0 270 < th dose independent rect. 16 9
190 439.99 wind 9.0 270 < th dose independent rect. 12 4
191 440.11 atmosphere 995.0 270 > th dose independent rect. 11 6
207 441.28 temperature 10.0 270 > th dose independent rect. 16 9
209 441.28 temperature 10.0 270 > th dose independent rect. 1 15
210 441.28 atmosphere 1015.0 270 < th dose independent rect. 1 15
217 441.50 humidity 50.0 270 > th dose independent rect. 5 7
222 441.71 wind 1.0 270 > th dose independent rect. 12 4
231 442.30 radiation 40.0 270 < th dose dependent rect. 15 10
236 442.56 temperature 10.0 1440 > th dose independent rect. 13 6
240 442.56 temperature 10.0 1440 > th dose independent rect. 19 18
243 442.56 atmosphere 995.0 1440 > th dose independent rect. 19 18
253 443.04 precipitation 0.1 270 < th dose independent rect. 1 15
254 443.04 precipitation 0.1 270 < th dose dependent rect. 1 15
263 443.38 radiation 1.0 270 > th dose independent rect. 13 2
278 443.77 wind 9.0 270 < th dose independent rect. 15 22
307 444.71 precipitation 0.1 270 < th dose independent rect. 13 2
308 444.71 precipitation 0.1 270 < th dose dependent rect. 13 2
316 445.37 precipitation 0.1 270 < th dose independent rect. 16 20
317 445.37 precipitation 0.1 270 < th dose dependent rect. 16 20
318 445.43 temperature 10.0 270 > th dose independent rect. 13 2
320 445.43 atmosphere 1010.0 270 < th dose independent rect. 13 2
322 445.43 temperature 10.0 270 > th dose independent rect. 15 22
330 446.08 wind 9.0 270 < th dose independent rect. 1 15
334 446.24 wind 9.0 270 < th dose independent rect. 13 2
349 446.98 temperature 30.0 270 < th dose independent rect. 17 18
359 447.50 radiation 10.0 90 < th dose dependent rect. 17 10
370 447.85 atmosphere 995.0 270 > th dose independent rect. 16 20
384 448.25 humidity 50.0 270 > th dose independent rect. 16 9
402 449.24 atmosphere 995.0 270 > th dose independent rect. 12 4
425 450.68 wind 1.0 270 > th dose independent rect. 13 2
430 451.01 precipitation 0.1 270 < th dose independent rect. 16 9
431 451.01 precipitation 0.1 270 < th dose dependent rect. 16 9
445 451.96 temperature 30.0 270 < th dose independent rect. 5 6
464 453.15 atmosphere 995.0 270 > th dose independent rect. 13 2
496 454.87 humidity 90.0 270 < th dose independent rect. 13 2
511 455.67 atmosphere 995.0 270 > th dose independent rect. 12 17
530 456.46 atmosphere 995.0 270 > th dose independent rect. 1 15
537 456.71 radiation 1.0 90 < th dose independent rect. 8 19
558 457.09 atmosphere 995.0 270 > th dose independent rect. 16 9
566 457.43 atmosphere 1015.0 270 < th dose dependent rect. 13 2
574 457.94 wind 9.0 10 < th dose independent rect. 19 17
575 457.95 temperature 15.0 10 > th dose independent rect. 19 17
576 458.04 radiation 1.0 90 < th dose dependent rect. 5 22
577 458.16 precipitation 0.1 10 < th dose independent rect. 12 7
579 458.16 precipitation 0.1 10 < th dose dependent rect. 12 7
582 458.26 humidity 50.0 270 > th dose independent rect. 13 2
590 458.88 wind 1.0 270 > th dose independent rect. 16 9
602 459.21 atmosphere 1015.0 90 < th dose dependent rect. 13 5
615 459.74 temperature 10.0 10 > th dose independent rect. 12 7
617 459.74 atmosphere 1015.0 10 < th dose independent rect. 12 7
619 459.74 atmosphere 995.0 10 > th dose independent rect. 19 17
644 460.69 humidity 90.0 90 < th dose independent rect. 18 18
658 461.26 precipitation 0.1 270 < th dose independent rect. 15 22
659 461.26 precipitation 0.1 270 < th dose dependent rect. 15 22
664 461.48 precipitation 0.1 10 < th dose independent rect. 19 17
665 461.48 precipitation 0.1 10 < th dose dependent rect. 19 17
668 461.53 humidity 80.0 270 > th dose independent rect. 22 8
671 461.74 humidity 90.0 270 < th dose dependent rect. 12 4
675 461.96 wind 1.0 90 > th dose dependent rect. 12 6
682 462.07 radiation 40.0 90 < th dose independent rect. 12 6
702 462.68 radiation 1.0 90 < th dose dependent rect. 7 20
703 462.72 wind 9.0 10 < th dose independent rect. 12 7
748 463.83 wind 1.0 10 > th dose independent rect. 12 7
750 463.97 humidity 90.0 270 < th dose dependent rect. 13 2
755 464.18 wind 7.0 90 < th dose independent rect. 18 9
761 464.47 radiation 40.0 270 < th dose independent rect. 17 18
771 464.83 radiation 1.0 270 > th dose independent rect. 4 7
799 465.45 humidity 60.0 90 > th dose independent rect. 18 9
832 466.62 temperature 10.0 270 > th dose independent rect. 21 9
833 466.62 temperature 30.0 270 < th dose independent rect. 21 9
834 466.62 humidity 50.0 270 > th dose independent rect. 21 9
837 466.62 atmosphere 995.0 270 > th dose independent rect. 21 9
838 466.62 radiation 20.0 270 < th dose independent rect. 21 9
841 466.62 temperature 10.0 270 > th dose independent rect. 6 15
908 468.25 wind 9.0 270 < th dose independent rect. 21 9
910 468.26 radiation 40.0 270 < th dose dependent rect. 21 9
933 468.89 wind 9.0 270 < th dose independent rect. 6 15
943 469.03 temperature 10.0 90 > th dose independent rect. 18 9
945 469.03 radiation 20.0 90 < th dose independent rect. 18 9
948 469.03 temperature 10.0 90 > th dose independent rect. 3 15
949 469.03 atmosphere 1015.0 90 < th dose independent rect. 3 15
950 469.05 temperature 30.0 10 < th dose independent rect. 18 9
960 469.24 atmosphere 995.0 90 > th dose independent rect. 18 9
970 469.54 precipitation 0.1 90 < th dose independent rect. 3 15
972 469.54 precipitation 0.1 90 < th dose dependent rect. 3 15