Os09g0441400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Elicitor-inducible cytochrome P450.
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Os09g0441400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Elicitor-inducible cytochrome P450.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.76 | 0.462 | 13.4 | -0.315 | 1.54 | -0.896 | 0.235 | -0.637 | -0.22 | 8.92 | 1.81 | 4346 | -- | -- |
| 97.2 | 0.459 | 13.4 | -0.453 | 1.52 | -0.839 | 0.265 | -- | -0.248 | 8.88 | 2.077 | 4360 | -- | -- |
| 96.94 | 0.459 | 13.4 | -0.316 | 1.53 | -0.9 | -- | -0.626 | -0.221 | 8.91 | 1.823 | 4352 | -- | -- |
| 97.4 | 0.46 | 13.4 | -0.43 | 1.53 | -0.828 | -- | -- | -0.249 | 8.89 | 2.023 | 4355 | -- | -- |
| 167.11 | 0.605 | 13.4 | -0.221 | -- | -0.875 | -- | 0.115 | -0.0721 | -- | 1.823 | 4352 | -- | -- |
| 110.69 | 0.493 | 13.3 | -0.209 | 1.56 | -- | 0.244 | -- | -0.0654 | 8.93 | -- | -- | -- | -- |
| 110.9 | 0.493 | 13.3 | -0.2 | 1.56 | -- | -- | -- | -0.0653 | 8.93 | -- | -- | -- | -- |
| 167.19 | 0.605 | 13.4 | -0.22 | -- | -0.874 | -- | -- | -0.0715 | -- | 1.823 | 4352 | -- | -- |
| 101.52 | 0.469 | 13.4 | -- | 1.54 | -0.683 | -- | -- | -0.186 | 8.93 | 2.788 | 4351 | -- | -- |
| 250.02 | 0.739 | 13.4 | -0.201 | -- | -- | -- | -- | -0.0548 | -- | -- | -- | -- | -- |
| 111.95 | 0.495 | 13.3 | -- | 1.56 | -- | -- | -- | -0.043 | 8.94 | -- | -- | -- | -- |
| 168.47 | 0.607 | 13.4 | -- | -- | -0.873 | -- | -- | -0.0471 | -- | 1.823 | 4352 | -- | -- |
| 251.09 | 0.74 | 13.4 | -- | -- | -- | -- | -- | -0.0325 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.44 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 3 | 95.80 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 7 | 95.84 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 8 | 95.87 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 11 | 95.91 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 15 | 95.97 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 17 | 96.02 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 20 | 96.17 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 13 |
| 37 | 96.49 | radiation | 1.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 38 | 96.49 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 40 | 96.53 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 44 | 96.62 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 16 |
| 45 | 96.63 | radiation | 1.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 50 | 96.65 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 54 | 96.68 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 20 |
| 56 | 96.69 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 81 | 96.84 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 15 |
| 95 | 96.91 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 115 | 96.96 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 135 | 97.00 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 20 |
| 144 | 97.02 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 5 | 12 |
| 151 | 97.03 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 15 |
| 154 | 97.03 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 158 | 97.04 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 12 |
| 167 | 97.05 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 22 |
| 181 | 97.07 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 2 | 18 |
| 205 | 97.09 | radiation | 1.0 | 4320 | < th | dose independent | no | NA | NA |
| 286 | 97.16 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 302 | 97.17 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 309 | 97.18 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 327 | 97.21 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 338 | 97.23 | radiation | 1.0 | 4320 | > th | dose independent | no | NA | NA |
| 397 | 97.24 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 416 | 97.26 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 18 |
| 425 | 97.27 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 16 |
| 435 | 97.28 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 471 | 97.31 | radiation | 1.0 | 4320 | < th | dose dependent | no | NA | NA |
| 529 | 97.40 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 553 | 97.47 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 564 | 97.48 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 581 | 97.51 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 12 |
| 587 | 97.53 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 599 | 97.55 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 608 | 97.57 | radiation | 1.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 622 | 97.59 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 639 | 97.61 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 669 | 97.67 | radiation | 1.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 816 | 97.99 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 836 | 98.02 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 13 | 7 |
| 840 | 98.02 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 15 | 5 |
| 856 | 98.04 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 13 | 14 |
| 881 | 98.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 913 | 98.10 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 928 | 98.11 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 933 | 98.12 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 937 | 98.12 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 958 | 98.12 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 960 | 98.12 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 962 | 98.12 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 4 | 8 |
| 971 | 98.13 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 982 | 98.14 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 1 | 1 |