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Os09g0440300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Matured fruit 60 kDa protein) (MF-60).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0206) R2 : 0.561
β1 : -1.25 (0.0755) R2dD : 0.275 R2D : 0.2
β2 : 0.882 (0.0532) R2dC : 0.266 R2C : 0.256
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.345 (0.044) R2dN8 : 0.0791 R2N8 : 0.0148
σ : 0.388
deviance : 68.56
__
_____
C
peak time of C : 19.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.5 0.356 11.3 -1.52 0.917 1.75 0.41 4.87 -0.356 19.6 0.17 1423 -- --
64.94 0.375 11.3 -1.26 0.926 0.407 0.126 -- -0.27 19.6 19.32 2776 -- --
57.95 0.355 11.3 -1.53 0.904 1.76 -- 4.88 -0.355 19.6 0.17 1426 -- --
62.01 0.367 11.2 -1.19 0.947 0.461 -- -- -0.246 19.7 63.81 1283 -- --
96.79 0.458 11.3 -1.48 -- 1.91 -- 4.9 -0.376 -- 0.1706 1471 -- --
68.25 0.387 11.3 -1.25 0.882 -- 0.349 -- -0.345 19.2 -- -- -- --
68.56 0.388 11.3 -1.25 0.882 -- -- -- -0.345 19.3 -- -- -- --
99.54 0.467 11.2 -1.27 -- 0.309 -- -- -0.351 -- 2.546 1482 -- --
98.45 0.462 11.2 -- 1.02 0.615 -- -- -0.0948 19.8 55.01 1283 -- --
109.85 0.49 11.2 -1.27 -- -- -- -- -0.359 -- -- -- -- --
109.99 0.491 11.2 -- 0.894 -- -- -- -0.205 19.2 -- -- -- --
134.93 0.541 11.2 -- -- 1.23 -- -- -0.322 -- 1.209 1488 -- --
152.32 0.576 11.2 -- -- -- -- -- -0.219 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.67 wind 3 43200 < th dose independent rect. 2 2
2 54.72 wind 3 43200 > th dose independent rect. 2 2
8 55.63 humidity 90 14400 > th dose dependent rect. 3 16
12 55.66 humidity 90 14400 > th dose dependent rect. 2 18
17 55.78 humidity 90 14400 > th dose independent rect. 5 3
26 55.90 humidity 90 14400 > th dose dependent sin 2 NA
29 55.91 humidity 90 14400 > th dose dependent rect. 5 5
36 55.97 humidity 90 14400 > th dose dependent rect. 4 10
38 55.98 wind 7 14400 > th dose dependent rect. 24 13
45 56.02 wind 7 14400 > th dose dependent rect. 2 11
64 56.15 radiation 30 14400 > th dose independent rect. 16 1
81 56.17 wind 5 43200 < th dose dependent rect. 1 3
93 56.29 wind 7 14400 > th dose independent rect. 24 13
97 56.31 humidity 90 14400 < th dose independent rect. 5 3
102 56.35 wind 7 14400 > th dose independent rect. 2 11
106 56.38 wind 9 43200 < th dose independent rect. 12 2
116 56.42 humidity 90 14400 > th dose independent rect. 24 20
117 56.42 wind 9 43200 > th dose dependent rect. 13 3
128 56.46 wind 7 14400 < th dose independent rect. 24 13
131 56.48 wind 7 14400 < th dose independent rect. 2 11
136 56.50 humidity 90 14400 > th dose dependent rect. 9 22
155 56.55 humidity 90 14400 > th dose dependent rect. 4 23
156 56.56 humidity 90 14400 > th dose independent sin 4 NA
167 56.58 humidity 90 14400 > th dose dependent no NA NA
174 56.59 humidity 90 14400 > th dose dependent rect. 19 23
178 56.60 humidity 90 14400 > th dose dependent rect. 15 23
181 56.61 humidity 90 14400 > th dose independent rect. 9 22
188 56.62 humidity 90 14400 > th dose independent rect. 1 13
193 56.62 humidity 90 14400 > th dose dependent rect. 13 23
195 56.63 wind 5 4320 > th dose independent rect. 18 1
196 56.63 wind 9 14400 > th dose independent rect. 5 6
213 56.65 wind 1 43200 > th dose dependent rect. 24 4
214 56.66 wind 9 43200 > th dose independent rect. 12 4
225 56.68 humidity 90 14400 > th dose independent rect. 18 21
322 56.78 humidity 90 14400 > th dose independent no NA NA
334 56.79 humidity 90 14400 < th dose independent rect. 24 20
365 56.82 radiation 40 14400 > th dose dependent rect. 15 1
386 56.83 humidity 90 14400 > th dose independent rect. 5 23
387 56.83 wind 7 14400 > th dose dependent rect. 5 6
417 56.88 wind 9 14400 < th dose independent rect. 5 6
429 56.90 wind 7 43200 > th dose dependent rect. 10 1
438 56.91 humidity 90 14400 < th dose independent rect. 19 21
462 56.95 wind 9 43200 < th dose independent rect. 10 1
488 56.98 radiation 1 14400 < th dose dependent rect. 9 1
490 56.99 wind 5 4320 < th dose independent rect. 18 1
496 56.99 humidity 90 14400 < th dose independent rect. 19 17
498 56.99 humidity 90 14400 < th dose independent rect. 10 22
520 57.02 humidity 90 14400 < th dose independent sin 5 NA
523 57.02 humidity 90 14400 < th dose independent rect. 13 23
526 57.02 humidity 80 14400 > th dose dependent rect. 20 2
529 57.02 humidity 80 14400 > th dose dependent rect. 19 4
549 57.03 humidity 90 14400 < th dose independent rect. 13 20
577 57.05 humidity 90 14400 < th dose independent rect. 5 23
580 57.06 humidity 90 14400 < th dose independent no NA NA
581 57.06 wind 7 4320 < th dose independent rect. 15 4
676 57.14 wind 5 4320 > th dose dependent rect. 18 1
708 57.16 humidity 50 14400 > th dose dependent rect. 21 1
712 57.17 wind 7 4320 > th dose independent rect. 15 4
713 57.17 humidity 90 14400 < th dose independent rect. 1 11
742 57.21 wind 9 43200 > th dose independent rect. 10 1
759 57.23 humidity 90 14400 > th dose independent sin 13 NA
767 57.24 humidity 80 1440 < th dose independent rect. 2 12
786 57.26 wind 5 43200 < th dose dependent rect. 2 1
818 57.30 wind 3 43200 > th dose independent rect. 22 11
827 57.31 humidity 90 14400 < th dose independent rect. 10 18
835 57.32 wind 3 43200 < th dose independent rect. 22 11
849 57.33 humidity 90 14400 < th dose independent rect. 11 16
853 57.33 humidity 50 14400 > th dose dependent rect. 20 3
856 57.34 radiation 1 14400 > th dose independent rect. 8 2
872 57.35 radiation 1 14400 < th dose independent rect. 8 2
884 57.36 humidity 60 14400 > th dose independent rect. 3 5
937 57.42 radiation 1 1440 < th dose independent rect. 8 4
946 57.42 radiation 1 1440 < th dose dependent rect. 8 4
958 57.43 humidity 90 14400 < th dose independent rect. 13 14
964 57.44 wind 1 43200 < th dose independent rect. 20 1
979 57.46 humidity 90 14400 < th dose independent sin 15 NA
981 57.46 temperature 15 14400 > th dose independent rect. 9 2
997 57.47 radiation 20 4320 > th dose dependent rect. 6 2