Os09g0439600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exo70 exocyst complex subunit family protein.
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Os09g0439600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exo70 exocyst complex subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.32 | 0.212 | 11.5 | 1.52 | 0.79 | -0.591 | -0.409 | -1.17 | 0.364 | 2.83 | 1.57 | 4393 | -- | -- |
| 22.61 | 0.221 | 11.5 | 1.64 | 0.78 | -0.479 | -0.0958 | -- | 0.365 | 2.68 | 2.101 | 4417 | -- | -- |
| 20.89 | 0.213 | 11.5 | 1.53 | 0.792 | -0.593 | -- | -1.15 | 0.363 | 2.81 | 1.579 | 4385 | -- | -- |
| 22.68 | 0.222 | 11.5 | 1.64 | 0.787 | -0.506 | -- | -- | 0.364 | 2.83 | 2.12 | 4448 | -- | -- |
| 44.85 | 0.312 | 11.5 | 1.46 | -- | -0.681 | -- | -0.7 | 0.35 | -- | 2.321 | 6233 | -- | -- |
| 28.31 | 0.249 | 11.5 | 1.68 | 0.822 | -- | -0.314 | -- | 0.284 | 2.66 | -- | -- | -- | -- |
| 28.65 | 0.251 | 11.5 | 1.69 | 0.821 | -- | -- | -- | 0.286 | 2.63 | -- | -- | -- | -- |
| 40.24 | 0.295 | 11.5 | 1.4 | -- | -0.786 | -- | -- | 0.388 | -- | 2.32 | 4747 | -- | -- |
| 72.86 | 0.398 | 11.5 | -- | 0.945 | -1.06 | -- | -- | 0.115 | 3.22 | 56.51 | 20288 | -- | -- |
| 68.05 | 0.385 | 11.5 | 1.72 | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
| 103.7 | 0.476 | 11.6 | -- | 0.854 | -- | -- | -- | 0.0981 | 2.66 | -- | -- | -- | -- |
| 99.03 | 0.463 | 11.6 | -- | -- | -1.09 | -- | -- | -0.151 | -- | 59.96 | 47520 | -- | -- |
| 146.3 | 0.565 | 11.6 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 3 | 18.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 5 | 18.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 7 | 19.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 39 | 19.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 61 | 19.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 70 | 19.39 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 78 | 19.41 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 85 | 19.42 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 88 | 19.43 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 110 | 19.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 184 | 19.52 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 16 | 8 |
| 202 | 19.54 | temperature | 30.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 203 | 19.54 | temperature | 30.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 207 | 19.54 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 21 | NA |
| 258 | 19.56 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 323 | 19.60 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 519 | 19.68 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 520 | 19.68 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 536 | 19.69 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 16 | 13 |
| 539 | 19.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 544 | 19.70 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 550 | 19.70 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 584 | 19.71 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 621 | 19.72 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 812 | 19.75 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 16 |
| 818 | 19.76 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 819 | 19.76 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |