Os09g0436000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0436000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.57 | 0.296 | 10.1 | 0.83 | 0.874 | -0.456 | -0.999 | -0.305 | 0.0689 | 21.2 | 22.1 | 766 | -- | -- |
| 39.96 | 0.294 | 10.1 | 0.783 | 0.862 | -0.442 | -0.979 | -- | 0.0558 | 21.2 | 22.1 | 765 | -- | -- |
| 42.48 | 0.304 | 10.1 | 0.77 | 0.878 | -0.451 | -- | 0.0562 | 0.042 | 21.4 | 22 | 663 | -- | -- |
| 42.44 | 0.303 | 10.1 | 0.784 | 0.881 | -0.439 | -- | -- | 0.0535 | 21.5 | 22.1 | 600 | -- | -- |
| 84.76 | 0.429 | 10.1 | 0.617 | -- | -0.697 | -- | 0.137 | -0.0202 | -- | 21.9 | 750 | -- | -- |
| 48.49 | 0.326 | 10.1 | 0.888 | 0.963 | -- | -0.884 | -- | 0.192 | 21.3 | -- | -- | -- | -- |
| 51.3 | 0.335 | 10.1 | 0.919 | 0.965 | -- | -- | -- | 0.193 | 21.4 | -- | -- | -- | -- |
| 76.31 | 0.407 | 10.1 | 0.678 | -- | -0.782 | -- | -- | -0.104 | -- | 24.84 | 721 | -- | -- |
| 56.47 | 0.35 | 10.2 | -- | 0.826 | -0.638 | -- | -- | -0.0735 | 21.4 | 21.79 | 766 | -- | -- |
| 105.79 | 0.481 | 10.1 | 0.924 | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
| 73.56 | 0.401 | 10.1 | -- | 0.966 | -- | -- | -- | 0.0906 | 21.4 | -- | -- | -- | -- |
| 87.19 | 0.435 | 10.2 | -- | -- | -0.927 | -- | -- | -0.225 | -- | 24.7 | 764 | -- | -- |
| 128.32 | 0.529 | 10.1 | -- | -- | -- | -- | -- | 0.0868 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.40 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 5 | 38.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 10 | 38.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 11 | 38.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 18 | 39.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 25 | 39.37 | temperature | 25.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 41 | 39.75 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 49 | 39.84 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 58 | 39.92 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 61 | 39.93 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 64 | 39.94 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 71 | 39.98 | temperature | 15.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 95 | 40.10 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 117 | 40.18 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 134 | 40.23 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 139 | 40.26 | temperature | 25.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 165 | 40.35 | temperature | 25.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 171 | 40.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 187 | 40.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 191 | 40.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 193 | 40.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 202 | 40.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 228 | 40.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 229 | 40.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 233 | 40.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 275 | 40.62 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 292 | 40.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 313 | 40.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 314 | 40.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 316 | 40.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 13 |
| 318 | 40.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 334 | 40.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 348 | 40.77 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 380 | 40.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 383 | 40.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 388 | 40.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 404 | 40.87 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 413 | 40.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 455 | 40.96 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 477 | 40.99 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 479 | 40.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 547 | 41.08 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 558 | 41.11 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 563 | 41.12 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 626 | 41.20 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 668 | 41.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 699 | 41.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 739 | 41.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 747 | 41.38 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 755 | 41.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 756 | 41.39 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 764 | 41.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 767 | 41.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 10 |
| 776 | 41.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 15 |
| 788 | 41.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 13 |
| 790 | 41.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 793 | 41.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 13 |
| 795 | 41.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 15 |
| 818 | 41.44 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 867 | 41.48 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 871 | 41.48 | temperature | 20.0 | 720 | < th | dose independent | rect. | 12 | 18 |
| 884 | 41.49 | temperature | 20.0 | 720 | < th | dose independent | rect. | 14 | 16 |
| 915 | 41.51 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 945 | 41.53 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 16 |
| 964 | 41.54 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |