Os09g0432700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0432700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.49 | 0.85 | 4.09 | -0.692 | 0.829 | 0.969 | -1.11 | -0.0865 | -0.797 | 21.1 | 25.71 | 1314 | -- | -- |
| 327.5 | 0.843 | 4.09 | -0.67 | 0.829 | 0.958 | -1.11 | -- | -0.79 | 21.1 | 25.74 | 1313 | -- | -- |
| 331.66 | 0.848 | 4.09 | -0.646 | 0.85 | 0.94 | -- | -0.0487 | -0.793 | 21 | 25.72 | 1372 | -- | -- |
| 331.66 | 0.848 | 4.09 | -0.635 | 0.855 | 0.928 | -- | -- | -0.792 | 21.1 | 25.7 | 1387 | -- | -- |
| 345.22 | 0.865 | 4.08 | -0.766 | -- | 1.6 | -- | -0.222 | -0.874 | -- | 24.1 | 838 | -- | -- |
| 365.71 | 0.897 | 4.07 | -0.35 | 0.882 | -- | -1.02 | -- | -0.714 | 21.6 | -- | -- | -- | -- |
| 369.59 | 0.9 | 4.07 | -0.311 | 0.888 | -- | -- | -- | -0.713 | 21.5 | -- | -- | -- | -- |
| 345.12 | 0.865 | 4.09 | -0.7 | -- | 1.57 | -- | -- | -0.917 | -- | 23.7 | 812 | -- | -- |
| 341.37 | 0.861 | 4.05 | -- | 0.795 | 0.878 | -- | -- | -0.653 | 20.8 | 26.6 | 1197 | -- | -- |
| 416.05 | 0.953 | 4.05 | -0.305 | -- | -- | -- | -- | -0.715 | -- | -- | -- | -- | -- |
| 372.14 | 0.902 | 4.06 | -- | 0.887 | -- | -- | -- | -0.678 | 21.5 | -- | -- | -- | -- |
| 357.08 | 0.88 | 4.07 | -- | -- | 1.43 | -- | -- | -0.802 | -- | 24.1 | 803 | -- | -- |
| 418.5 | 0.955 | 4.04 | -- | -- | -- | -- | -- | -0.681 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 322.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 12 | 324.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 25 | 324.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 27 | 324.33 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 40 | 324.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 60 | 324.86 | temperature | 20 | 30 | > th | dose dependent | rect. | 22 | 22 |
| 72 | 324.99 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 78 | 325.04 | temperature | 25 | 1440 | > th | dose dependent | sin | 2 | NA |
| 83 | 325.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 86 | 325.11 | temperature | 10 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 110 | 325.27 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 232 | 326.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 261 | 326.31 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 301 | 326.50 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 339 | 326.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 399 | 326.79 | temperature | 10 | 1440 | > th | dose dependent | sin | 0 | NA |
| 460 | 326.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 463 | 326.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 474 | 326.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 583 | 327.27 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 600 | 327.35 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 693 | 327.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 723 | 327.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 5 |
| 754 | 327.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 759 | 327.68 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 797 | 327.72 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 849 | 327.83 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 907 | 327.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 914 | 327.95 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 938 | 328.02 | temperature | 30 | 1440 | < th | dose independent | sin | 4 | NA |
| 943 | 328.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 992 | 328.11 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |