Os09g0431200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GPCR, family 3, metabotropic glutamate receptor-like protein.
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Os09g0431200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GPCR, family 3, metabotropic glutamate receptor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.72 | 0.443 | 8.08 | -0.193 | 1.56 | -1.71 | 1.72 | 0.327 | -0.0977 | 15.9 | 10.99 | 76 | 4.08 | 17.3 |
| 88.87 | 0.439 | 8.09 | -0.219 | 1.54 | -1.71 | 1.83 | -- | -0.112 | 15.9 | 10.83 | 74 | 4.11 | 17.3 |
| 92.85 | 0.449 | 8.06 | -0.0638 | 1.55 | -1.69 | -- | 1.85 | -0.0473 | 16 | 11.6 | 80 | 4.1 | 17.2 |
| 99.43 | 0.464 | 8.09 | -0.225 | 1.52 | -1.63 | -- | -- | -0.108 | 16 | 10.74 | 70 | 4.17 | 17.3 |
| 147.46 | 0.566 | 7.99 | 0.359 | -- | -0.945 | -- | 1.86 | 0.0341 | -- | 16.31 | 4431 | 4.17 | 15.1 |
| 132.64 | 0.54 | 8.13 | -0.433 | 0.813 | -- | 0.933 | -- | -0.292 | 18.9 | -- | -- | -- | -- |
| 134.57 | 0.543 | 8.13 | -0.453 | 0.815 | -- | -- | -- | -0.291 | 19.3 | -- | -- | -- | -- |
| 138.3 | 0.548 | 8 | 0.125 | -- | -0.92 | -- | -- | 0.15 | -- | 18.56 | 9074 | 1.26 | 4.45 |
| 100.59 | 0.467 | 8.08 | -- | 1.54 | -1.67 | -- | -- | -0.0758 | 16 | 11.01 | 75 | 4.08 | 17.3 |
| 169.77 | 0.609 | 8.11 | -0.467 | -- | -- | -- | -- | -0.305 | -- | -- | -- | -- | -- |
| 139.97 | 0.553 | 8.12 | -- | 0.82 | -- | -- | -- | -0.241 | 19.2 | -- | -- | -- | -- |
| 106.48 | 0.481 | 8.07 | -- | -- | -1.87 | -- | -- | -0.0951 | -- | -12.92 | 7617 | 0.399 | 7.53 |
| 175.53 | 0.618 | 8.1 | -- | -- | -- | -- | -- | -0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.56 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 7 | 91.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 73 | 98.01 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 99 | 99.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 115 | 100.54 | temperature | 25.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 120 | 100.61 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 128 | 100.97 | temperature | 25.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 135 | 101.21 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 137 | 101.32 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 147 | 101.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 155 | 101.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 160 | 101.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 176 | 102.48 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 272 | 103.89 | temperature | 15.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 273 | 103.90 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 297 | 104.13 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 300 | 104.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 316 | 104.32 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 16 |
| 325 | 104.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 327 | 104.43 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 332 | 104.55 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 335 | 104.57 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 337 | 104.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 355 | 104.69 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 363 | 104.75 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 369 | 104.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 12 |
| 371 | 104.84 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 389 | 104.98 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 17 |
| 393 | 104.98 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 412 | 105.17 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 435 | 105.38 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 449 | 105.49 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 450 | 105.50 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 10 |
| 473 | 105.60 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 481 | 105.68 | wind | 7.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 486 | 105.70 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 490 | 105.73 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 497 | 105.76 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 515 | 105.87 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 537 | 106.00 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 539 | 106.02 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 543 | 106.05 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 547 | 106.07 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 554 | 106.11 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 557 | 106.12 | wind | 5.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 564 | 106.17 | wind | 7.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 584 | 106.26 | wind | 5.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 592 | 106.29 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 612 | 106.36 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 623 | 106.37 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 654 | 106.50 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 657 | 106.50 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 664 | 106.53 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 682 | 106.59 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 684 | 106.59 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 705 | 106.66 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 752 | 106.77 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 757 | 106.79 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 759 | 106.79 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 761 | 106.81 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 764 | 106.82 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 769 | 106.83 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 771 | 106.83 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 1 | 10 |
| 775 | 106.84 | radiation | 1.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 791 | 106.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 794 | 106.89 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 804 | 106.92 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 812 | 106.94 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 814 | 106.94 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 820 | 106.96 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 846 | 107.03 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 6 |
| 849 | 107.04 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 863 | 107.07 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 897 | 107.16 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 905 | 107.18 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 935 | 107.24 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 936 | 107.24 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 954 | 107.29 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 955 | 107.29 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 964 | 107.30 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 975 | 107.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 985 | 107.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 986 | 107.32 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 7 |
| 987 | 107.32 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 990 | 107.32 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 991 | 107.32 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 7 |