Os09g0431100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GPCR, family 3, metabotropic glutamate receptor-like protein.
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Os09g0431100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GPCR, family 3, metabotropic glutamate receptor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.81 | 0.676 | 10.1 | 2.73 | 0.511 | 0.109 | -0.295 | -10.8 | 0.937 | 4.76 | 31.5 | 758 | -- | -- |
| 213.52 | 0.681 | 9.93 | 3.86 | 0.683 | -0.926 | 0.164 | -- | 1 | 4.59 | 29.8 | 2110 | -- | -- |
| 206.96 | 0.67 | 10.1 | 2.73 | 0.511 | 0.113 | -- | -10.8 | 0.937 | 4.5 | 31.48 | 761 | -- | -- |
| 212.94 | 0.68 | 9.94 | 3.87 | 0.629 | -0.947 | -- | -- | 0.961 | 4.89 | 29.9 | 2104 | -- | -- |
| 217.66 | 0.687 | 10.1 | 2.82 | -- | -0.0258 | -- | -11.7 | 0.931 | -- | 31.5 | 672 | -- | -- |
| 239.16 | 0.725 | 9.91 | 3.64 | 0.715 | -- | -0.0584 | -- | 1.06 | 5.51 | -- | -- | -- | -- |
| 239.17 | 0.724 | 9.91 | 3.64 | 0.714 | -- | -- | -- | 1.06 | 5.49 | -- | -- | -- | -- |
| 223.74 | 0.697 | 9.9 | 4 | -- | -1.07 | -- | -- | 1.18 | -- | 28.8 | 588 | -- | -- |
| 582.53 | 1.12 | 10 | -- | 0.643 | -0.498 | -- | -- | 0.573 | 4.84 | 30.8 | 677 | -- | -- |
| 265.69 | 0.762 | 9.92 | 3.66 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 588.21 | 1.13 | 10 | -- | 0.775 | -- | -- | -- | 0.65 | 5.3 | -- | -- | -- | -- |
| 600.41 | 1.14 | 10 | -- | -- | -0.908 | -- | -- | 0.577 | -- | 30.68 | 533 | -- | -- |
| 619.58 | 1.16 | 10 | -- | -- | -- | -- | -- | 0.667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.13 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 2 | 187.61 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 3 | 188.12 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 4 | 188.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 6 | 189.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 7 | 189.51 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 8 | 189.51 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 189.61 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 11 | 190.07 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 12 | 190.41 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 19 | 191.78 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 28 | 192.54 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 50 | 194.47 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 62 | 194.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 68 | 195.26 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 69 | 195.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 70 | 195.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 72 | 195.45 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 73 | 195.46 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 98 | 196.60 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 101 | 196.68 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 102 | 196.69 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 12 |
| 109 | 196.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 115 | 196.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 118 | 197.01 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 119 | 197.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 120 | 197.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 148 | 197.68 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 151 | 197.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 7 |
| 152 | 197.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 7 |
| 154 | 197.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 7 |
| 163 | 197.92 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 167 | 197.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 168 | 197.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 170 | 197.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 197 | 198.36 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 206 | 198.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 7 |
| 218 | 198.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 10 |
| 219 | 198.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 10 |
| 234 | 198.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 236 | 198.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 242 | 198.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 12 |
| 256 | 199.16 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 276 | 199.31 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 319 | 199.69 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 333 | 199.77 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 361 | 199.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 384 | 200.08 | wind | 7.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 398 | 200.16 | wind | 7.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 400 | 200.17 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 418 | 200.31 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 448 | 200.56 | wind | 5.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 520 | 200.96 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 18 | NA |
| 582 | 201.30 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 612 | 201.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 648 | 201.64 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 679 | 201.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 12 |
| 682 | 201.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 12 |
| 687 | 201.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 12 |
| 748 | 202.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 817 | 202.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 991 | 203.34 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 15 | 6 |