Os09g0428300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GPCR, family 3, metabotropic glutamate receptor-like protein.
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Os09g0428300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GPCR, family 3, metabotropic glutamate receptor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 431.68 | 0.976 | 4.71 | 2.76 | 0.432 | -1.23 | -0.705 | -2.15 | 0.525 | 8.69 | 6.298 | 37 | -- | -- |
| 438.79 | 0.976 | 4.7 | 2.68 | 0.549 | -1.08 | 1.81 | -- | 0.536 | 10.6 | 5.993 | 49 | -- | -- |
| 431.28 | 0.967 | 4.71 | 2.73 | 0.491 | -1.24 | -- | -1.78 | 0.519 | 8.34 | 5.553 | 58 | -- | -- |
| 450.26 | 0.988 | 4.71 | 2.74 | 0.48 | -1.27 | -- | -- | 0.517 | 8.14 | 5.683 | 62 | -- | -- |
| 438.21 | 0.975 | 4.72 | 2.73 | -- | -1.44 | -- | -1.7 | 0.523 | -- | 6.372 | 33 | -- | -- |
| 463.61 | 1.01 | 4.66 | 2.67 | 1.74 | -- | 1.88 | -- | 0.61 | 11.4 | -- | -- | -- | -- |
| 478.77 | 1.02 | 4.66 | 2.75 | 1.73 | -- | -- | -- | 0.616 | 11.3 | -- | -- | -- | -- |
| 455.38 | 0.994 | 4.72 | 2.74 | -- | -1.44 | -- | -- | 0.515 | -- | 6.293 | 29 | -- | -- |
| 647.11 | 1.18 | 4.77 | -- | 0.476 | -1.25 | -- | -- | 0.225 | 7.98 | 4.589 | 62 | -- | -- |
| 666.52 | 1.21 | 4.7 | 2.7 | -- | -- | -- | -- | 0.599 | -- | -- | -- | -- | -- |
| 677.37 | 1.22 | 4.73 | -- | 1.7 | -- | -- | -- | 0.311 | 11.2 | -- | -- | -- | -- |
| 652.76 | 1.19 | 4.78 | -- | -- | -1.41 | -- | -- | 0.231 | -- | 4.21 | 33 | -- | -- |
| 858.94 | 1.37 | 4.77 | -- | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 421.67 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 75 | 422.42 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 14 | NA |
| 172 | 422.86 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 207 | 422.97 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 20 | 20 |
| 229 | 423.00 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 279 | 423.08 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 473 | 423.71 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 479 | 423.72 | radiation | 10 | 30 | < th | dose dependent | rect. | 2 | 15 |
| 508 | 423.87 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 518 | 423.95 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 534 | 424.05 | temperature | 10 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 575 | 424.41 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 591 | 424.50 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 594 | 424.52 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 601 | 424.53 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 9 | 17 |
| 602 | 424.54 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 609 | 424.55 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 11 | 15 |
| 616 | 424.56 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 639 | 424.62 | atmosphere | 1010 | 14400 | < th | dose independent | sin | 14 | NA |
| 659 | 424.65 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 664 | 424.66 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 677 | 424.67 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 6 | 21 |
| 712 | 424.70 | atmosphere | 1010 | 14400 | < th | dose independent | no | NA | NA |
| 728 | 424.72 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 747 | 424.74 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 762 | 424.76 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 11 | 16 |
| 795 | 424.79 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 833 | 424.82 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 835 | 424.83 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 847 | 424.84 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 873 | 424.87 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 880 | 424.87 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 902 | 424.89 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 907 | 424.90 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 15 | 22 |
| 923 | 424.92 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 942 | 424.93 | atmosphere | 1010 | 14400 | > th | dose independent | sin | 15 | NA |
| 944 | 424.93 | atmosphere | 1010 | 14400 | > th | dose independent | no | NA | NA |
| 960 | 424.93 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 974 | 424.94 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 22 | 23 |