Os09g0427100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0427100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.32 | 0.595 | 3.59 | -2.05 | 0.354 | 0.946 | -0.998 | 4.03 | -0.393 | 11.9 | 0.4098 | 4286 | -- | -- |
| 168.46 | 0.605 | 3.5 | -1.45 | 0.425 | 0.166 | -0.7 | -- | -0.261 | 11.6 | 12.38 | 15804 | -- | -- |
| 162.55 | 0.594 | 3.6 | -2 | 0.362 | 0.994 | -- | 4.21 | -0.375 | 12.1 | 0.1778 | 5852 | -- | -- |
| 169.28 | 0.606 | 3.51 | -1.34 | 0.421 | -0.363 | -- | -- | -0.305 | 12.3 | 213.6 | 47520 | -- | -- |
| 172.26 | 0.611 | 3.6 | -2.02 | -- | 1.08 | -- | 4.13 | -0.39 | -- | 0.1322 | 5693 | -- | -- |
| 169.53 | 0.61 | 3.51 | -1.45 | 0.421 | -- | -0.748 | -- | -0.316 | 12.1 | -- | -- | -- | -- |
| 171.93 | 0.614 | 3.51 | -1.48 | 0.424 | -- | -- | -- | -0.319 | 12.3 | -- | -- | -- | -- |
| 172 | 0.613 | 3.52 | -1.49 | -- | -0.586 | -- | -- | -0.319 | -- | 223.1 | 47520 | -- | -- |
| 208.22 | 0.672 | 3.47 | -- | 0.432 | -0.942 | -- | -- | -0.159 | 12.4 | 262.2 | 47520 | -- | -- |
| 183.24 | 0.633 | 3.52 | -1.5 | -- | -- | -- | -- | -0.325 | -- | -- | -- | -- | -- |
| 229.81 | 0.709 | 3.47 | -- | 0.446 | -- | -- | -- | -0.154 | 12.5 | -- | -- | -- | -- |
| 219.98 | 0.691 | 3.48 | -- | -- | -0.957 | -- | -- | -0.164 | -- | 235 | 47520 | -- | -- |
| 242.29 | 0.727 | 3.48 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.36 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 5 | 153.48 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 8 | 153.50 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 19 | 153.62 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 23 | 153.71 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 50 | 154.22 | humidity | 60 | 43200 | < th | dose dependent | sin | 6 | NA |
| 52 | 154.24 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 55 | 154.26 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 59 | 154.27 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 71 | 154.30 | humidity | 70 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 73 | 154.32 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 161 | 154.81 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 172 | 154.88 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 174 | 154.91 | humidity | 60 | 43200 | < th | dose independent | sin | 9 | NA |
| 186 | 154.98 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 187 | 154.98 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 284 | 155.51 | humidity | 60 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 293 | 155.57 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 325 | 155.74 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 341 | 155.77 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 343 | 155.77 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 20 |
| 364 | 155.78 | humidity | 60 | 43200 | < th | dose dependent | rect. | 3 | 18 |
| 449 | 155.89 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 560 | 156.55 | humidity | 60 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 567 | 156.58 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 593 | 156.72 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 603 | 156.75 | radiation | 20 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 612 | 156.78 | humidity | 60 | 43200 | > th | dose independent | sin | 9 | NA |
| 626 | 156.83 | radiation | 30 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 645 | 156.85 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 646 | 156.85 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 652 | 156.87 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 655 | 156.89 | humidity | 50 | 43200 | > th | dose independent | sin | 16 | NA |
| 687 | 156.95 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 699 | 156.97 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 708 | 157.01 | temperature | 20 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 727 | 157.08 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 730 | 157.09 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 18 |
| 733 | 157.10 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 16 |
| 746 | 157.11 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 756 | 157.12 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 774 | 157.14 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 802 | 157.17 | temperature | 20 | 14400 | < th | dose dependent | sin | 4 | NA |
| 866 | 157.22 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 19 |
| 904 | 157.27 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 13 |