Os09g0426100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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Os09g0426100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.21 | 0.65 | 6.27 | 0.192 | 1.84 | -2.43 | 3.41 | -3.13 | -0.608 | 0.351 | 0.9374 | 269 | 9.92 | -- |
| 196.09 | 0.652 | 6.31 | 0.0225 | 2.31 | -2.88 | 0.535 | -- | -0.674 | 0.712 | 1.766 | 328 | 10.2 | -- |
| 194.85 | 0.65 | 6.29 | -0.0185 | 1.82 | -2.39 | -- | 0.197 | -0.642 | 0.244 | 0.8583 | 253 | 9.76 | -- |
| 194.82 | 0.65 | 6.29 | -0.0348 | 1.9 | -2.45 | -- | -- | -0.66 | 0.334 | 0.8276 | 246 | 9.55 | -- |
| 222.36 | 0.695 | 6.26 | 0.0543 | -- | -1.2 | -- | -0.302 | -0.634 | -- | 2.29 | 1671 | 9.71 | -- |
| 242.79 | 0.73 | 6.23 | 0.123 | 0.448 | -- | -0.427 | -- | -0.542 | 12.9 | -- | -- | -- | -- |
| 243.54 | 0.731 | 6.23 | 0.108 | 0.449 | -- | -- | -- | -0.544 | 13 | -- | -- | -- | -- |
| 222.07 | 0.694 | 6.25 | 0.00788 | -- | -1.09 | -- | -- | -0.634 | -- | 3.391 | 1614 | 8.52 | -- |
| 194.73 | 0.65 | 6.29 | -- | 2.03 | -2.53 | -- | -- | -0.648 | 0.404 | 0.87 | 239 | 9.28 | -- |
| 256.08 | 0.748 | 6.24 | 0.0908 | -- | -- | -- | -- | -0.553 | -- | -- | -- | -- | -- |
| 243.85 | 0.73 | 6.24 | -- | 0.447 | -- | -- | -- | -0.556 | 13 | -- | -- | -- | -- |
| 219.03 | 0.689 | 6.27 | -- | -- | -1.3 | -- | -- | -0.714 | -- | 3.81 | 1514 | 5.6 | -- |
| 256.3 | 0.747 | 6.24 | -- | -- | -- | -- | -- | -0.563 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.50 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 2 | 190.61 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 3 | 190.95 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 4 | 191.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 5 | 191.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 6 | 191.27 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 7 | 191.33 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 8 | 191.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 9 | 191.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 14 | 192.27 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 18 | 192.51 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 20 | 192.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 21 | 192.70 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 22 | 192.78 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 44 | 193.76 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 46 | 193.80 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 48 | 193.85 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 49 | 193.85 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 51 | 193.85 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 52 | 193.85 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 58 | 193.85 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 59 | 193.85 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 64 | 193.89 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 79 | 194.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 80 | 194.15 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 86 | 194.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 100 | 194.65 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 114 | 194.93 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 117 | 195.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 118 | 195.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 119 | 195.16 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 120 | 195.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 124 | 195.26 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 134 | 195.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 136 | 195.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 3 |
| 137 | 195.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 146 | 196.10 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 152 | 196.26 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 153 | 196.34 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 155 | 196.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 166 | 196.63 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 167 | 196.67 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 20 |
| 168 | 196.68 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 4 |
| 169 | 196.68 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 171 | 196.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 173 | 196.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 175 | 196.76 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 190 | 197.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 23 |
| 206 | 197.39 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 208 | 197.50 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 19 |
| 210 | 197.51 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 215 | 197.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 217 | 197.56 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 218 | 197.57 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 219 | 197.57 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 223 | 197.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 224 | 197.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 225 | 197.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 252 | 198.02 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 20 |
| 258 | 198.18 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 261 | 198.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 267 | 198.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 291 | 198.56 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 300 | 198.67 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 301 | 198.67 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 302 | 198.67 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 309 | 198.72 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 311 | 198.73 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 314 | 198.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 322 | 198.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 323 | 198.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 324 | 198.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 331 | 198.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 356 | 199.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 366 | 199.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 1 |
| 368 | 199.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 372 | 199.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 374 | 199.13 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 376 | 199.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 389 | 199.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 421 | 199.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 432 | 199.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 450 | 199.53 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 484 | 199.75 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 511 | 199.88 | humidity | 80.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 514 | 199.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 516 | 199.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 519 | 199.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 530 | 200.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 567 | 200.36 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 581 | 200.49 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 600 | 200.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 702 | 201.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 711 | 201.56 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 20 |
| 712 | 201.56 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 20 |
| 729 | 201.71 | humidity | 80.0 | 10 | < th | dose independent | rect. | 15 | 17 |
| 730 | 201.71 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 751 | 201.88 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 5 |
| 753 | 201.90 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 759 | 201.94 | humidity | 80.0 | 90 | < th | dose independent | rect. | 15 | 10 |
| 763 | 201.96 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 769 | 202.01 | wind | 1.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 782 | 202.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 786 | 202.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 21 |
| 787 | 202.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 21 |
| 837 | 202.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 877 | 202.75 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 901 | 202.87 | radiation | 20.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 925 | 203.07 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 930 | 203.12 | humidity | 80.0 | 90 | < th | dose independent | rect. | 15 | 12 |
| 996 | 203.35 | wind | 1.0 | 270 | > th | dose dependent | rect. | 13 | 5 |