Os09g0426000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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Os09g0426000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.59 | 0.411 | 9.2 | -0.741 | 1.1 | 1.47 | 0.13 | 2.18 | -0.174 | 3.1 | 19.9 | 5558 | -- | -- |
| 81.39 | 0.42 | 9.11 | -0.409 | 1.09 | 0.982 | 0.3 | -- | -0.0779 | 3.04 | 20.9 | 6726 | -- | -- |
| 76.65 | 0.408 | 9.2 | -0.741 | 1.1 | 1.47 | -- | 2.17 | -0.175 | 3.08 | 19.92 | 5558 | -- | -- |
| 81.21 | 0.42 | 9.1 | -0.426 | 1.09 | 0.989 | -- | -- | -0.0686 | 3.05 | 21 | 6708 | -- | -- |
| 143.29 | 0.558 | 9.2 | -0.682 | -- | 1.4 | -- | 2.03 | -0.15 | -- | 19.9 | 6160 | -- | -- |
| 99.02 | 0.467 | 9.17 | -1.14 | 1.06 | -- | 0.123 | -- | -0.396 | 3.14 | -- | -- | -- | -- |
| 99.07 | 0.466 | 9.18 | -1.14 | 1.06 | -- | -- | -- | -0.397 | 3.12 | -- | -- | -- | -- |
| 147.31 | 0.565 | 9.11 | -0.452 | -- | 0.956 | -- | -- | -0.0716 | -- | 21 | 6016 | -- | -- |
| 80.08 | 0.417 | 9.06 | -- | 1.09 | 1.07 | -- | -- | 0.126 | 3.07 | 22.93 | 47520 | -- | -- |
| 162.91 | 0.596 | 9.17 | -1.1 | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
| 133.54 | 0.541 | 9.15 | -- | 1.04 | -- | -- | -- | -0.269 | 3.12 | -- | -- | -- | -- |
| 147.58 | 0.566 | 9.06 | -- | -- | 1.01 | -- | -- | 0.125 | -- | 22.98 | 47520 | -- | -- |
| 194.75 | 0.651 | 9.15 | -- | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.03 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 2 | 70.32 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 3 | 70.34 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 4 | 70.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 5 | 70.87 | humidity | 80 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 7 | 71.13 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 8 | 71.22 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 11 | 71.37 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 5 |
| 12 | 71.37 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 21 | 71.69 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 28 | 71.82 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 30 | 71.85 | wind | 1 | 43200 | < th | dose independent | sin | 12 | NA |
| 31 | 71.85 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 32 | 71.87 | wind | 1 | 43200 | > th | dose independent | sin | 11 | NA |
| 36 | 72.06 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 5 |
| 38 | 72.06 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 42 | 72.07 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 47 | 72.11 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 50 | 72.12 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 71 | 72.16 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 114 | 72.26 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 127 | 72.29 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 5 | NA |
| 155 | 72.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 196 | 72.40 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 205 | 72.41 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 206 | 72.41 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 268 | 72.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 303 | 72.52 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 304 | 72.52 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 328 | 72.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 9 |
| 336 | 72.55 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 338 | 72.55 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 359 | 72.56 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 373 | 72.57 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 473 | 72.66 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 508 | 72.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 511 | 72.71 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 541 | 72.75 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 568 | 72.78 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 578 | 72.80 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 7 |
| 582 | 72.80 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 617 | 72.86 | humidity | 70 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 650 | 72.93 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 661 | 72.96 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 675 | 72.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 689 | 73.02 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 712 | 73.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 717 | 73.06 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 738 | 73.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 742 | 73.11 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 743 | 73.11 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 781 | 73.16 | wind | 1 | 43200 | < th | dose dependent | sin | 10 | NA |
| 813 | 73.19 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 817 | 73.20 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 820 | 73.20 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 821 | 73.20 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 839 | 73.22 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 843 | 73.22 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 845 | 73.22 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 855 | 73.23 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 872 | 73.24 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 908 | 73.25 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 955 | 73.28 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 2 | NA |
| 959 | 73.28 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 982 | 73.28 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 998 | 73.29 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 17 | 2 |