Os09g0425400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0425400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 180.31 | 0.631 | 5.15 | 1.16 | 1.42 | -1.25 | -0.0875 | -3.65 | -0.0383 | 8.66 | 0.3196 | 5617 | -- | -- |
| 192.65 | 0.646 | 5.14 | 0.997 | 1.43 | -1.48 | -0.139 | -- | -0.0835 | 8.71 | 0.4951 | 5620 | -- | -- |
| 180.34 | 0.625 | 5.15 | 1.16 | 1.42 | -1.25 | -- | -3.65 | -0.0383 | 8.66 | 0.3197 | 5617 | -- | -- |
| 192.54 | 0.646 | 5.12 | 0.934 | 1.42 | -1.48 | -- | -- | -0.0809 | 8.73 | 0.3659 | 5620 | -- | -- |
| 292.63 | 0.797 | 5.18 | 1.11 | -- | -1.15 | -- | -3.47 | -0.025 | -- | 0.3338 | 6154 | -- | -- |
| 223.92 | 0.702 | 5.09 | 0.721 | 1.4 | -- | -0.154 | -- | 0.084 | 8.67 | -- | -- | -- | -- |
| 224 | 0.701 | 5.09 | 0.716 | 1.4 | -- | -- | -- | 0.084 | 8.67 | -- | -- | -- | -- |
| 305.53 | 0.814 | 5.16 | 0.901 | -- | -1.35 | -- | -- | -0.0678 | -- | 0.316 | 5884 | -- | -- |
| 214.26 | 0.682 | 5.13 | -- | 1.4 | -1.19 | -- | -- | -0.144 | 8.71 | 0.3499 | 5882 | -- | -- |
| 335.26 | 0.856 | 5.12 | 0.719 | -- | -- | -- | -- | 0.096 | -- | -- | -- | -- | -- |
| 237.51 | 0.721 | 5.1 | -- | 1.41 | -- | -- | -- | 0.00431 | 8.63 | -- | -- | -- | -- |
| 325.23 | 0.84 | 5.18 | -- | -- | -1.1 | -- | -- | -0.146 | -- | 0.3426 | 6228 | -- | -- |
| 348.91 | 0.872 | 5.14 | -- | -- | -- | -- | -- | 0.0161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.29 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 2 | 172.55 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 4 | 174.63 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 6 | 175.46 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 8 | 175.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 11 | 176.00 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 12 | 176.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 17 | 176.09 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 26 | 176.32 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 30 | 176.37 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 41 | 176.57 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 10 | 11 |
| 58 | 176.74 | humidity | 80.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 99 | 177.05 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 110 | 177.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 155 | 177.31 | humidity | 80.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 174 | 177.40 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 178 | 177.41 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 185 | 177.42 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 192 | 177.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 198 | 177.44 | humidity | 70.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 201 | 177.44 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 203 | 177.44 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 216 | 177.48 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 10 | 13 |
| 225 | 177.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 245 | 177.54 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 255 | 177.55 | humidity | 70.0 | 14400 | > th | dose independent | no | NA | NA |
| 335 | 177.57 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 428 | 177.74 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 469 | 177.78 | humidity | 70.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 474 | 177.80 | humidity | 70.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 517 | 177.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 20 |
| 525 | 177.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 534 | 177.89 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 19 | NA |
| 587 | 177.96 | humidity | 70.0 | 14400 | < th | dose independent | no | NA | NA |
| 768 | 178.13 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 775 | 178.14 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 807 | 178.18 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 821 | 178.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 832 | 178.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 874 | 178.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 910 | 178.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 920 | 178.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |