Os09g0425300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Procyclic form specific polypeptide B1-alpha precursor (Procyclin B1- alpha) (PARP).
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Os09g0425300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Procyclic form specific polypeptide B1-alpha precursor (Procyclin B1- alpha) (PARP).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.59 | 0.328 | 3.24 | 0.158 | 0.138 | 0.213 | -0.209 | 1.23 | -0.0216 | 6.49 | 91.01 | 5902 | -- | -- |
| 50.53 | 0.331 | 3.24 | 0.0765 | 0.136 | 0.3 | -0.23 | -- | -0.0561 | 6.4 | 91 | 4334 | -- | -- |
| 48.69 | 0.325 | 3.24 | 0.157 | 0.137 | 0.222 | -- | 1.24 | -0.0263 | 6.75 | 91 | 5928 | -- | -- |
| 50.66 | 0.332 | 3.24 | 0.0712 | 0.134 | 0.288 | -- | -- | -0.0483 | 6.66 | 91 | 4329 | -- | -- |
| 49.68 | 0.328 | 3.24 | 0.162 | -- | 0.21 | -- | 1.23 | -0.0187 | -- | 91.06 | 5861 | -- | -- |
| 51.54 | 0.337 | 3.22 | 0.0585 | 0.137 | -- | -0.237 | -- | 0.00284 | 6.33 | -- | -- | -- | -- |
| 51.66 | 0.337 | 3.22 | 0.0561 | 0.137 | -- | -- | -- | 0.00389 | 6.78 | -- | -- | -- | -- |
| 51.63 | 0.335 | 3.24 | 0.0642 | -- | 0.283 | -- | -- | -0.0437 | -- | 89 | 4290 | -- | -- |
| 50.77 | 0.332 | 3.24 | -- | 0.139 | 0.286 | -- | -- | -0.0508 | 6.68 | 88.51 | 4325 | -- | -- |
| 52.63 | 0.339 | 3.23 | 0.0592 | -- | -- | -- | -- | 0.00655 | -- | -- | -- | -- | -- |
| 51.74 | 0.336 | 3.23 | -- | 0.137 | -- | -- | -- | -0.00236 | 6.76 | -- | -- | -- | -- |
| 51.74 | 0.335 | 3.24 | -- | -- | 0.279 | -- | -- | -0.0467 | -- | 88 | 4288 | -- | -- |
| 52.73 | 0.339 | 3.23 | -- | -- | -- | -- | -- | -1.12e-05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.84 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 12 | 45.96 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 13 | 45.97 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 14 | 45.97 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 17 | 46.01 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 18 | 46.01 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 19 | 46.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 22 | 46.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 26 | 46.03 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 32 | 46.03 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 33 | 46.03 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 53 | 46.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 57 | 46.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 58 | 46.09 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 62 | 46.11 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 63 | 46.11 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 67 | 46.16 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 71 | 46.18 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 74 | 46.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 77 | 46.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 78 | 46.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 81 | 46.18 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 82 | 46.18 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 84 | 46.18 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 89 | 46.18 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 90 | 46.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 91 | 46.18 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 93 | 46.18 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 98 | 46.18 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 101 | 46.21 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 104 | 46.25 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 105 | 46.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 106 | 46.28 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 110 | 46.32 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 116 | 46.39 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 123 | 46.55 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 189 | 47.10 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 193 | 47.23 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 218 | 47.81 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 221 | 48.02 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 233 | 48.29 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 240 | 48.37 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 242 | 48.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 248 | 48.43 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 260 | 48.44 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 6 |
| 282 | 48.52 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 297 | 48.64 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 304 | 48.66 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 306 | 48.67 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 8 | 11 |
| 311 | 48.68 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 312 | 48.68 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 320 | 48.68 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 327 | 48.70 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 354 | 48.73 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 374 | 48.75 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 375 | 48.75 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 16 |
| 376 | 48.75 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 21 | 16 |
| 378 | 48.75 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 427 | 48.78 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 471 | 48.80 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 475 | 48.80 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 491 | 48.81 | humidity | 80.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 533 | 48.83 | humidity | 80.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 536 | 48.83 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 602 | 48.86 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 661 | 48.88 | wind | 5.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 717 | 48.90 | wind | 5.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 799 | 48.92 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 815 | 48.92 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 816 | 48.93 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 878 | 48.94 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 903 | 48.95 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 912 | 48.95 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 913 | 48.95 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 939 | 48.96 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |