Os09g0422500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulose synthase (Fragment).
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Os09g0422500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cellulose synthase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.81 | 0.612 | 3.28 | -0.281 | 0.166 | -0.741 | -0.607 | 1.37 | 0.0337 | 1.74 | 20.1 | 2668 | -- | -- |
| 173.94 | 0.614 | 3.34 | -0.368 | 0.192 | -1.03 | -0.505 | -- | 0.0104 | 1.05 | 20 | 3480 | -- | -- |
| 170.97 | 0.609 | 3.27 | -0.253 | 0.183 | -0.766 | -- | 1.36 | 0.0315 | 2.75 | 20 | 2766 | -- | -- |
| 173.4 | 0.613 | 3.32 | -0.486 | 0.172 | -1.03 | -- | -- | -0.0213 | 2.11 | 19.7 | 2671 | -- | -- |
| 172.21 | 0.611 | 3.27 | -0.238 | -- | -0.734 | -- | 1.45 | 0.0427 | -- | 19.9 | 2966 | -- | -- |
| 192.16 | 0.65 | 3.38 | -1.03 | 0.0793 | -- | -0.521 | -- | -0.262 | 0.0133 | -- | -- | -- | -- |
| 192.82 | 0.65 | 3.38 | -1.02 | 0.129 | -- | -- | -- | -0.261 | 3.41 | -- | -- | -- | -- |
| 174.55 | 0.615 | 3.32 | -0.428 | -- | -1.08 | -- | -- | -0.00764 | -- | 19.52 | 3180 | -- | -- |
| 176.8 | 0.619 | 3.29 | -- | 0.152 | -1.35 | -- | -- | 0.0709 | 1.95 | 19.51 | 3459 | -- | -- |
| 193.75 | 0.65 | 3.38 | -1.01 | -- | -- | -- | -- | -0.258 | -- | -- | -- | -- | -- |
| 220.08 | 0.694 | 3.35 | -- | 0.109 | -- | -- | -- | -0.148 | 3.44 | -- | -- | -- | -- |
| 177.34 | 0.62 | 3.3 | -- | -- | -1.4 | -- | -- | 0.0467 | -- | 19.1 | 3436 | -- | -- |
| 220.75 | 0.693 | 3.35 | -- | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.58 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 2 | 161.80 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 5 | 163.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 6 | 164.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 10 | 164.98 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 16 | 166.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 17 | 166.31 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 22 | 166.77 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 30 | 167.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 31 | 167.13 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 32 | 167.19 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 43 | 167.52 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 45 | 167.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 46 | 167.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 47 | 167.69 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 48 | 167.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 53 | 167.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 18 |
| 54 | 167.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 55 | 167.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 56 | 167.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 59 | 167.89 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 16 |
| 63 | 167.90 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 22 |
| 64 | 167.91 | wind | 3.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 68 | 167.93 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 71 | 167.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 18 |
| 77 | 167.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 22 |
| 78 | 167.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 95 | 168.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 22 |
| 101 | 168.05 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 103 | 168.05 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 114 | 168.08 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 115 | 168.08 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 128 | 168.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 138 | 168.15 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 142 | 168.17 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 18 |
| 144 | 168.17 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 146 | 168.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 152 | 168.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 157 | 168.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 158 | 168.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 162 | 168.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 7 | 22 |
| 164 | 168.22 | wind | 3.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 172 | 168.23 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 18 |
| 181 | 168.24 | wind | 3.0 | 14400 | < th | dose independent | no | NA | NA |
| 188 | 168.25 | wind | 3.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 194 | 168.26 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 203 | 168.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 216 | 168.28 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 217 | 168.28 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 227 | 168.29 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 239 | 168.32 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 250 | 168.34 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 290 | 168.40 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 305 | 168.42 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 322 | 168.44 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 333 | 168.46 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 345 | 168.47 | wind | 3.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 349 | 168.48 | wind | 3.0 | 14400 | > th | dose independent | rect. | 7 | 22 |
| 352 | 168.48 | wind | 3.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 354 | 168.48 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 357 | 168.48 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 359 | 168.49 | wind | 3.0 | 14400 | > th | dose independent | no | NA | NA |
| 364 | 168.49 | wind | 3.0 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 390 | 168.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 424 | 168.57 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 444 | 168.60 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 470 | 168.60 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 501 | 168.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 513 | 168.65 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 523 | 168.66 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 582 | 168.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 587 | 168.75 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 599 | 168.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 17 | 11 |
| 611 | 168.80 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 4 |
| 617 | 168.80 | wind | 3.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 651 | 168.87 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 712 | 168.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 773 | 169.07 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 779 | 169.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 797 | 169.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 840 | 169.18 | wind | 3.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 873 | 169.24 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 875 | 169.24 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 927 | 169.36 | wind | 3.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 966 | 169.42 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 971 | 169.43 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 984 | 169.45 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |