Os09g0416200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose transporter (Fragment).
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Os09g0416200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucose transporter (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.73 | 0.375 | 13.4 | 1.21 | 0.764 | 0.633 | -0.326 | -4.08 | 0.63 | 2.17 | 26.04 | 9 | -- | -- |
| 68.15 | 0.387 | 13.3 | 1.61 | 0.725 | 0.337 | 0.13 | -- | 0.732 | 2.32 | 26.7 | 9 | -- | -- |
| 63.87 | 0.372 | 13.4 | 1.26 | 0.748 | 0.677 | -- | -4.07 | 0.657 | 2.17 | 26.7 | 8 | -- | -- |
| 68.21 | 0.387 | 13.3 | 1.61 | 0.722 | 0.327 | -- | -- | 0.732 | 2.29 | 26.7 | 9 | -- | -- |
| 87.59 | 0.438 | 13.3 | 1.52 | -- | -0.272 | -- | -1.82 | 0.726 | -- | 25.01 | 15 | -- | -- |
| 69.66 | 0.391 | 13.3 | 1.65 | 0.627 | -- | 0.0307 | -- | 0.738 | 2.21 | -- | -- | -- | -- |
| 69.67 | 0.391 | 13.3 | 1.65 | 0.627 | -- | -- | -- | 0.737 | 2.2 | -- | -- | -- | -- |
| 88.1 | 0.437 | 13.3 | 1.75 | -- | -0.444 | -- | -- | 0.804 | -- | 23.78 | 47 | -- | -- |
| 132.79 | 0.537 | 13.4 | -- | 0.966 | 0.723 | -- | -- | 0.486 | 2.32 | 22.53 | 9 | -- | -- |
| 93.09 | 0.451 | 13.3 | 1.67 | -- | -- | -- | -- | 0.753 | -- | -- | -- | -- | -- |
| 141.23 | 0.556 | 13.4 | -- | 0.658 | -- | -- | -- | 0.554 | 2.26 | -- | -- | -- | -- |
| 97.13 | 0.459 | 13.5 | -- | -- | 1.34 | -- | -- | 0.164 | -- | -12.3 | 47520 | -- | -- |
| 167.01 | 0.603 | 13.4 | -- | -- | -- | -- | -- | 0.567 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 6 | 60.93 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 11 | 61.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 11 |
| 18 | 61.47 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 27 | 61.56 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 1 |
| 47 | 61.89 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 20 |
| 50 | 61.94 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 11 |
| 55 | 62.01 | temperature | 30 | 10 | < th | dose independent | rect. | 9 | 10 |
| 76 | 62.14 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 80 | 62.20 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 7 |
| 84 | 62.24 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 9 |
| 114 | 62.40 | temperature | 25 | 10 | > th | dose dependent | sin | 3 | NA |
| 124 | 62.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 130 | 62.52 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 2 |
| 131 | 62.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 154 | 62.59 | temperature | 25 | 270 | > th | dose dependent | sin | 6 | NA |
| 176 | 62.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 183 | 62.71 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 4 |
| 258 | 62.95 | temperature | 30 | 10 | < th | dose independent | sin | 22 | NA |
| 263 | 62.96 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 7 |
| 282 | 63.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 22 |
| 308 | 63.10 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 323 | 63.17 | temperature | 30 | 10 | < th | dose independent | rect. | 24 | 19 |
| 326 | 63.17 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 338 | 63.21 | temperature | 30 | 10 | < th | dose independent | rect. | 7 | 12 |
| 345 | 63.25 | temperature | 30 | 10 | < th | dose independent | rect. | 22 | 21 |
| 346 | 63.25 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 351 | 63.27 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 371 | 63.32 | temperature | 25 | 10 | < th | dose independent | rect. | 1 | 15 |
| 374 | 63.33 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 1 |
| 378 | 63.34 | temperature | 30 | 10 | < th | dose independent | rect. | 21 | 23 |
| 381 | 63.36 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 385 | 63.37 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 389 | 63.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 390 | 63.37 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 401 | 63.40 | temperature | 25 | 10 | < th | dose independent | rect. | 1 | 13 |
| 405 | 63.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 11 |
| 416 | 63.44 | wind | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 437 | 63.47 | wind | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 440 | 63.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 13 |
| 466 | 63.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 3 |
| 470 | 63.53 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 476 | 63.54 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 482 | 63.55 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 486 | 63.56 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 500 | 63.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 3 |
| 502 | 63.59 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 514 | 63.60 | radiation | 20 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 544 | 63.63 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 547 | 63.64 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 589 | 63.68 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 604 | 63.69 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 617 | 63.69 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 627 | 63.71 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 646 | 63.72 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 654 | 63.73 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 655 | 63.73 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 685 | 63.75 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 706 | 63.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 710 | 63.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 744 | 63.78 | radiation | 30 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 754 | 63.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 796 | 63.80 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 830 | 63.82 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 851 | 63.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 853 | 63.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 13 |
| 869 | 63.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 11 |
| 954 | 63.89 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 16 |
| 974 | 63.89 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 14 |