Os09g0415700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os09g0415700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.27 | 0.402 | 11.4 | -0.124 | 1.08 | -0.753 | -0.544 | -0.308 | -0.539 | 20.4 | 71.99 | 1165 | -- | -- |
| 73.46 | 0.399 | 11.4 | -0.161 | 1.09 | -0.763 | -0.491 | -- | -0.551 | 20.4 | 71.99 | 1167 | -- | -- |
| 74.14 | 0.401 | 11.4 | -0.124 | 1.08 | -0.751 | -- | -0.171 | -0.543 | 20.4 | 72 | 1168 | -- | -- |
| 74.18 | 0.401 | 11.4 | -0.152 | 1.08 | -0.757 | -- | -- | -0.552 | 20.4 | 71.02 | 1167 | -- | -- |
| 97 | 0.459 | 11.3 | -0.151 | -- | -1.59 | -- | -0.235 | -0.57 | -- | 73.72 | 810 | -- | -- |
| 92.68 | 0.451 | 11.4 | -0.0144 | 1.21 | -- | -0.262 | -- | -0.448 | 21 | -- | -- | -- | -- |
| 92.91 | 0.451 | 11.4 | -0.00573 | 1.21 | -- | -- | -- | -0.448 | 21 | -- | -- | -- | -- |
| 96.51 | 0.458 | 11.3 | -0.184 | -- | -1.54 | -- | -- | -0.529 | -- | 73.19 | 823 | -- | -- |
| 74.78 | 0.403 | 11.4 | -- | 1.07 | -0.746 | -- | -- | -0.534 | 20.4 | 71.01 | 1164 | -- | -- |
| 177.22 | 0.622 | 11.3 | -0.00449 | -- | -- | -- | -- | -0.456 | -- | -- | -- | -- | -- |
| 92.91 | 0.451 | 11.4 | -- | 1.21 | -- | -- | -- | -0.447 | 21 | -- | -- | -- | -- |
| 97.37 | 0.46 | 11.3 | -- | -- | -1.53 | -- | -- | -0.505 | -- | 73.12 | 815 | -- | -- |
| 177.22 | 0.621 | 11.3 | -- | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.22 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 2 | 72.24 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 3 | 72.26 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 9 | 72.27 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 13 | 72.28 | humidity | 80 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 15 | 72.36 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 18 | 72.42 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 27 | 72.43 | humidity | 70 | 14400 | < th | dose independent | sin | 13 | NA |
| 44 | 72.50 | humidity | 80 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 69 | 72.54 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 78 | 72.62 | humidity | 70 | 14400 | > th | dose independent | sin | 13 | NA |
| 92 | 72.72 | humidity | 70 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 107 | 72.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 120 | 72.76 | humidity | 60 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 198 | 72.92 | humidity | 70 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 204 | 72.93 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 22 |
| 212 | 72.94 | humidity | 70 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 253 | 72.98 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 286 | 73.01 | humidity | 70 | 90 | > th | dose independent | rect. | 6 | 20 |
| 297 | 73.03 | humidity | 70 | 14400 | < th | dose independent | no | NA | NA |
| 298 | 73.03 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 381 | 73.05 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 5 |
| 387 | 73.06 | humidity | 80 | 14400 | < th | dose dependent | sin | 16 | NA |
| 409 | 73.08 | humidity | 60 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 427 | 73.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 465 | 73.17 | humidity | 60 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 495 | 73.19 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 566 | 73.31 | humidity | 70 | 14400 | > th | dose independent | no | NA | NA |
| 571 | 73.31 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 668 | 73.35 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 719 | 73.39 | radiation | 20 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 835 | 73.58 | humidity | 50 | 14400 | > th | dose dependent | sin | 17 | NA |
| 857 | 73.62 | humidity | 70 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 867 | 73.62 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 881 | 73.65 | humidity | 70 | 270 | > th | dose independent | rect. | 4 | 21 |