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Os09g0415400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.027) R2 : 0.49
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.33 (0.0642) R2dC : 0.481 R2C : 0.474
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.189 (0.0567) R2dN8 : 0.016 R2N8 : 0.00946
σ : 0.509
deviance : 118.23
__
_____
C
peak time of C : 11.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.21 0.439 10.8 0.355 1.26 -0.849 0.0426 2.3 0.463 11.6 18.79 3996 -- --
93.31 0.45 10.9 0.122 1.35 -0.949 0.157 -- 0.486 11.6 13.79 23352 -- --
87.2 0.435 10.8 0.355 1.26 -0.857 -- 2.28 0.462 11.6 18.4 3979 -- --
92.6 0.448 10.9 0.246 1.3 -1.01 -- -- 0.496 11.7 12.52 23437 -- --
175.61 0.617 10.9 0.358 -- -1.26 -- 2.07 0.527 -- 18.03 2371 -- --
107.52 0.486 11 -0.637 1.32 -- -0.0224 -- 0.118 11.7 -- -- -- --
107.52 0.486 11 -0.638 1.32 -- -- -- 0.118 11.7 -- -- -- --
182.79 0.63 10.9 0.178 -- -1.51 -- -- 0.479 -- 14.58 2353 -- --
91.6 0.446 10.9 -- 1.28 -1.06 -- -- 0.396 11.6 12.8 7002 -- --
217.38 0.689 11 -0.675 -- -- -- -- 0.102 -- -- -- -- --
118.23 0.509 10.9 -- 1.33 -- -- -- 0.189 11.7 -- -- -- --
179.9 0.625 10.9 -- -- -1.43 -- -- 0.41 -- 13.42 2359 -- --
229.39 0.707 11 -- -- -- -- -- 0.177 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.96 temperature 15.0 270 > th dose dependent rect. 24 7
12 79.68 temperature 20.0 270 > th dose independent rect. 24 7
13 79.73 temperature 10.0 270 > th dose dependent rect. 24 20
16 80.03 temperature 10.0 270 > th dose dependent rect. 1 18
33 81.72 temperature 15.0 10 > th dose dependent rect. 1 8
51 82.55 atmosphere 1010.0 270 < th dose independent rect. 11 9
52 82.64 precipitation 0.1 270 < th dose independent rect. 7 17
54 82.64 precipitation 0.1 270 < th dose dependent rect. 7 17
55 82.69 temperature 20.0 270 > th dose independent rect. 1 18
57 82.76 radiation 10.0 270 < th dose independent rect. 24 18
58 82.77 radiation 30.0 270 < th dose independent rect. 13 17
59 82.81 radiation 10.0 270 < th dose independent rect. 24 8
62 82.85 temperature 15.0 270 > th dose independent rect. 11 9
64 82.93 humidity 70.0 270 > th dose independent rect. 24 7
77 83.15 temperature 30.0 270 < th dose independent rect. 24 7
78 83.15 humidity 50.0 270 > th dose independent rect. 24 7
80 83.15 atmosphere 995.0 270 > th dose independent rect. 24 7
82 83.15 temperature 30.0 270 < th dose independent rect. 20 16
83 83.15 temperature 10.0 270 > th dose independent rect. 7 17
84 83.16 wind 9.0 270 < th dose independent rect. 24 7
85 83.16 atmosphere 1015.0 270 < th dose independent rect. 24 7
89 83.18 temperature 10.0 270 > th dose independent rect. 20 16
90 83.18 atmosphere 995.0 270 > th dose independent rect. 20 16
91 83.20 precipitation 0.1 270 < th dose independent rect. 24 7
96 83.20 precipitation 0.1 270 < th dose dependent rect. 24 7
98 83.25 radiation 30.0 270 < th dose independent rect. 12 7
100 83.28 wind 9.0 270 < th dose independent rect. 20 15
117 83.48 radiation 30.0 270 < th dose independent rect. 13 5
120 83.50 wind 9.0 270 < th dose independent rect. 11 9
123 83.54 precipitation 0.1 270 < th dose independent rect. 20 16
124 83.54 precipitation 0.1 270 < th dose dependent rect. 20 16
125 83.54 radiation 10.0 270 < th dose dependent rect. 24 18
126 83.55 radiation 40.0 270 < th dose dependent rect. 24 7
127 83.55 temperature 10.0 10 > th dose dependent rect. 1 21
129 83.58 wind 1.0 270 > th dose independent rect. 12 8
131 83.59 wind 9.0 270 < th dose independent rect. 7 17
133 83.60 temperature 20.0 720 > th dose dependent rect. 19 14
134 83.60 temperature 10.0 270 > th dose dependent rect. 13 18
137 83.63 humidity 50.0 270 > th dose independent rect. 20 15
139 83.66 temperature 20.0 720 > th dose dependent sin 10 NA
163 83.80 humidity 70.0 270 > th dose independent rect. 18 7
167 83.83 wind 1.0 270 > th dose independent rect. 7 17
171 83.83 radiation 1.0 270 < th dose dependent rect. 18 7
177 83.88 radiation 40.0 14400 < th dose dependent rect. 21 8
197 84.05 precipitation 0.1 90 < th dose independent rect. 9 16
199 84.05 precipitation 0.1 90 < th dose dependent rect. 9 16
204 84.08 radiation 10.0 270 < th dose dependent rect. 23 20
209 84.11 precipitation 0.1 270 < th dose independent rect. 19 18
212 84.11 precipitation 0.1 270 < th dose dependent rect. 19 18
216 84.14 temperature 30.0 270 < th dose independent rect. 18 7
228 84.17 atmosphere 995.0 270 > th dose independent rect. 7 17
233 84.24 temperature 30.0 270 < th dose independent rect. 7 17
237 84.26 radiation 1.0 270 < th dose independent rect. 18 7
240 84.28 humidity 50.0 270 > th dose dependent rect. 24 7
264 84.39 precipitation 0.1 270 < th dose independent rect. 18 7
265 84.39 precipitation 0.1 270 < th dose dependent rect. 18 7
285 84.51 radiation 30.0 90 < th dose dependent rect. 1 19
292 84.54 wind 9.0 270 < th dose independent rect. 19 6
298 84.55 wind 9.0 270 < th dose independent rect. 1 18
303 84.56 radiation 1.0 14400 > th dose independent rect. 18 12
307 84.57 temperature 10.0 270 > th dose independent rect. 6 8
308 84.57 atmosphere 995.0 270 > th dose independent rect. 6 8
309 84.57 atmosphere 1015.0 270 < th dose independent rect. 6 8
310 84.57 temperature 10.0 270 > th dose independent rect. 14 16
312 84.58 temperature 10.0 270 > th dose independent rect. 19 6
315 84.58 atmosphere 995.0 270 > th dose independent rect. 19 6
323 84.58 atmosphere 1015.0 270 < th dose independent rect. 1 18
337 84.64 precipitation 0.1 270 < th dose independent rect. 12 8
339 84.64 precipitation 0.1 270 < th dose dependent rect. 12 8
347 84.69 precipitation 0.1 270 < th dose independent rect. 6 8
348 84.69 precipitation 0.1 270 < th dose dependent rect. 6 8
379 84.85 radiation 10.0 10 < th dose independent rect. 1 21
390 84.90 temperature 20.0 270 > th dose independent rect. 13 18
404 84.95 temperature 10.0 90 > th dose independent rect. 9 16
408 84.96 radiation 40.0 90 < th dose dependent rect. 15 18
420 85.01 precipitation 0.1 270 < th dose independent rect. 13 6
422 85.01 precipitation 0.1 270 < th dose dependent rect. 13 6
431 85.02 wind 9.0 270 < th dose dependent rect. 24 7
438 85.04 atmosphere 1015.0 270 < th dose independent rect. 7 17
452 85.08 radiation 40.0 90 < th dose dependent rect. 15 16
463 85.09 temperature 10.0 720 > th dose dependent rect. 19 16
469 85.12 wind 9.0 270 < th dose independent rect. 6 8
488 85.17 radiation 30.0 10 < th dose dependent rect. 1 21
491 85.18 radiation 30.0 10 < th dose dependent rect. 1 19
494 85.20 atmosphere 1015.0 270 < th dose dependent rect. 13 6
495 85.21 wind 9.0 270 < th dose independent rect. 14 16
542 85.34 radiation 40.0 270 < th dose dependent rect. 13 5
552 85.36 humidity 50.0 270 > th dose independent rect. 7 17
558 85.37 temperature 10.0 720 > th dose dependent rect. 17 18
597 85.51 radiation 20.0 10 < th dose independent rect. 1 9
634 85.57 precipitation 0.1 270 < th dose independent rect. 1 17
637 85.57 precipitation 0.1 270 < th dose dependent rect. 1 17
645 85.60 wind 7.0 270 < th dose independent rect. 20 3
646 85.60 radiation 1.0 14400 > th dose independent rect. 4 3
651 85.60 atmosphere 995.0 270 > th dose independent rect. 12 8
662 85.61 radiation 1.0 14400 < th dose independent rect. 21 9
685 85.64 radiation 1.0 14400 < th dose independent rect. 19 11
691 85.65 wind 9.0 270 < th dose independent rect. 23 21
710 85.69 temperature 10.0 270 > th dose dependent rect. 12 8
715 85.70 radiation 1.0 14400 < th dose independent rect. 4 3
724 85.71 temperature 10.0 270 > th dose independent rect. 20 3
725 85.71 temperature 30.0 270 < th dose independent rect. 20 3
726 85.71 humidity 50.0 270 > th dose independent rect. 20 3
729 85.71 atmosphere 995.0 270 > th dose independent rect. 20 3
730 85.71 radiation 1.0 270 < th dose independent rect. 20 3
736 85.71 wind 1.0 270 > th dose independent rect. 6 8
739 85.71 radiation 1.0 270 < th dose dependent rect. 20 3
777 85.81 radiation 40.0 90 < th dose dependent rect. 13 8
787 85.86 radiation 40.0 10 < th dose dependent rect. 14 19
796 85.89 precipitation 0.1 270 < th dose independent rect. 20 3
797 85.89 precipitation 0.1 270 < th dose dependent rect. 20 3
804 85.91 radiation 10.0 1440 < th dose dependent rect. 21 8
805 85.92 radiation 1.0 270 > th dose independent rect. 6 8
821 85.95 atmosphere 1015.0 90 < th dose dependent rect. 15 6
850 85.98 atmosphere 1015.0 270 < th dose independent rect. 24 20
860 86.01 radiation 40.0 90 < th dose independent rect. 15 6
863 86.02 wind 9.0 270 < th dose dependent rect. 20 3
897 86.04 temperature 20.0 1440 > th dose dependent rect. 6 1
934 86.12 atmosphere 995.0 90 > th dose independent rect. 9 16
938 86.13 temperature 10.0 90 > th dose independent rect. 15 6
940 86.13 atmosphere 1010.0 90 < th dose independent rect. 15 6
954 86.16 humidity 90.0 14400 > th dose dependent rect. 23 1
999 86.26 atmosphere 1015.0 270 < th dose independent rect. 20 16