Os09g0413600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1666 family protein.
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Os09g0413600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1666 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.74 | 0.285 | 10.9 | 0.793 | 0.981 | 0.524 | 0.0728 | 1.61 | -0.576 | 5.13 | 67.01 | 5456 | -- | -- |
| 40.38 | 0.296 | 10.9 | 0.771 | 0.977 | 0.617 | 0.117 | -- | -0.567 | 5.14 | 67.23 | 5466 | -- | -- |
| 36.75 | 0.282 | 10.9 | 0.793 | 0.981 | 0.525 | -- | 1.61 | -0.576 | 5.13 | 67 | 5457 | -- | -- |
| 39.3 | 0.292 | 10.9 | 0.752 | 0.971 | 0.599 | -- | -- | -0.494 | 5.17 | 66 | 4047 | -- | -- |
| 86.59 | 0.433 | 10.9 | 0.856 | -- | 0.621 | -- | 1.56 | -0.548 | -- | 67 | 5587 | -- | -- |
| 46.22 | 0.319 | 10.9 | 0.735 | 0.998 | -- | 0.135 | -- | -0.58 | 4.94 | -- | -- | -- | -- |
| 46.27 | 0.319 | 10.9 | 0.735 | 0.999 | -- | -- | -- | -0.58 | 4.94 | -- | -- | -- | -- |
| 88.78 | 0.439 | 10.9 | 0.783 | -- | 0.733 | -- | -- | -0.446 | -- | 66.83 | 4112 | -- | -- |
| 51.84 | 0.335 | 10.9 | -- | 1.01 | 0.548 | -- | -- | -0.597 | 5.04 | 67 | 2669 | -- | -- |
| 98.79 | 0.464 | 11 | 0.771 | -- | -- | -- | -- | -0.555 | -- | -- | -- | -- | -- |
| 60.49 | 0.364 | 11 | -- | 1.01 | -- | -- | -- | -0.662 | 4.92 | -- | -- | -- | -- |
| 99.56 | 0.465 | 11 | -- | -- | 0.595 | -- | -- | -0.622 | -- | 69 | 1245 | -- | -- |
| 114.47 | 0.499 | 11 | -- | -- | -- | -- | -- | -0.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.91 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 34.17 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 5 | 34.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 6 | 34.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 7 | 34.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 8 | 34.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 34.72 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 10 | 34.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 11 | 34.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 13 | 34.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 19 | 34.90 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 20 | 34.93 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 33 | 35.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 37 | 35.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 60 | 35.13 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 6 |
| 63 | 35.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 81 | 35.28 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 83 | 35.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 86 | 35.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 94 | 35.36 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 108 | 35.45 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 117 | 35.50 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 158 | 35.69 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 169 | 35.72 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 172 | 35.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 173 | 35.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 177 | 35.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 182 | 35.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 194 | 35.83 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 216 | 35.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 222 | 35.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 235 | 35.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 236 | 36.00 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 267 | 36.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 270 | 36.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 285 | 36.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 288 | 36.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 301 | 36.15 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 318 | 36.20 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 329 | 36.22 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 331 | 36.22 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 334 | 36.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 339 | 36.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 342 | 36.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 399 | 36.35 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 469 | 36.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 490 | 36.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 494 | 36.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 521 | 36.51 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 525 | 36.52 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 531 | 36.52 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 543 | 36.53 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 604 | 36.63 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 709 | 36.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 803 | 36.88 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 839 | 36.91 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 847 | 36.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 851 | 36.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 964 | 37.02 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 979 | 37.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |