Os09g0400300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195).
FiT-DB / Search/ Help/ Sample detail
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Os09g0400300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 356 | 0.887 | 10.1 | -1.69 | 2.15 | -3.14 | -0.727 | -5.53 | -0.355 | 15.7 | 4.828 | 264 | 2.07 | 2.9 |
| 382.76 | 0.911 | 10.1 | -1.12 | 2.17 | -3.31 | 0.172 | -- | -0.156 | 15.8 | 4.943 | 219 | 2.05 | 3.28 |
| 356.38 | 0.879 | 10.1 | -1.68 | 2.19 | -3.14 | -- | -5.08 | -0.361 | 15.8 | 4.496 | 257 | 2.1 | 2.87 |
| 379.87 | 0.908 | 10.1 | -1.35 | 2.16 | -3.59 | -- | -- | -0.268 | 15.7 | 4.701 | 211 | 2.03 | 3.47 |
| 463.49 | 1 | 10.1 | -1.51 | -- | -4.36 | -- | -2.7 | -0.205 | -- | 8.503 | 344 | 0.0167 | 4.95 |
| 573.25 | 1.12 | 10.2 | -1.58 | 3.97 | -- | 2.73 | -- | -0.378 | 16.6 | -- | -- | -- | -- |
| 592.42 | 1.14 | 10.2 | -1.56 | 3.98 | -- | -- | -- | -0.364 | 16.6 | -- | -- | -- | -- |
| 483.45 | 1.02 | 10.1 | -1.37 | -- | -4.66 | -- | -- | -0.288 | -- | 7.825 | 322 | 0.00835 | 5.22 |
| 427.65 | 0.963 | 10.1 | -- | 2.14 | -3.64 | -- | -- | -0.214 | 15.8 | 4.496 | 215 | 1.98 | 3.46 |
| 1438.06 | 1.77 | 10.1 | -1.72 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 656.85 | 1.2 | 10.1 | -- | 4.01 | -- | -- | -- | -0.189 | 16.5 | -- | -- | -- | -- |
| 530.47 | 1.07 | 10.1 | -- | -- | -4.7 | -- | -- | -0.108 | -- | 7.174 | 309 | 0.0167 | 5.48 |
| 1515.86 | 1.82 | 10.1 | -- | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 357.67 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 2 | 357.93 | wind | 5.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 4 | 367.32 | wind | 5.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 8 | 368.63 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 19 | 377.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 3 |
| 20 | 377.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 29 | 381.20 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 37 | 384.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 38 | 384.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 50 | 387.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 60 | 389.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 64 | 390.37 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 73 | 391.82 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 75 | 392.30 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 78 | 392.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 81 | 392.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 84 | 392.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 85 | 392.34 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 90 | 392.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 91 | 392.36 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 100 | 393.05 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 114 | 395.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 126 | 397.18 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 127 | 397.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 129 | 397.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 130 | 397.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 133 | 397.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 134 | 397.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 138 | 397.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 146 | 397.93 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 147 | 397.95 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 161 | 397.98 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 179 | 398.50 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 237 | 401.77 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 270 | 403.76 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 297 | 405.62 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 307 | 406.70 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 312 | 407.14 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 321 | 407.61 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 325 | 407.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 326 | 407.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 335 | 408.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 336 | 408.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 348 | 409.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 349 | 409.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 357 | 410.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 358 | 410.17 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 359 | 410.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 392 | 410.65 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 415 | 411.83 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 422 | 412.35 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 423 | 412.40 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 433 | 413.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 435 | 413.13 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 459 | 413.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 462 | 413.47 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 482 | 413.99 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 498 | 414.71 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 501 | 415.05 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 2 |
| 502 | 415.05 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 505 | 415.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 506 | 415.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 509 | 415.28 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 515 | 415.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 518 | 415.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 520 | 415.63 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 550 | 416.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 556 | 416.31 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 557 | 416.31 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 560 | 416.45 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 561 | 416.45 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 562 | 416.46 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 563 | 416.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 564 | 416.46 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 566 | 416.46 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 567 | 416.46 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 572 | 416.46 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 573 | 416.46 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 580 | 416.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 582 | 416.53 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 583 | 416.53 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 586 | 416.53 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 587 | 416.53 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 592 | 416.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 599 | 416.69 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 608 | 417.07 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 622 | 417.59 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 630 | 417.78 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 638 | 417.96 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 676 | 418.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 684 | 419.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 709 | 419.57 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 712 | 419.61 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 745 | 419.81 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 755 | 419.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 766 | 420.21 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 778 | 420.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 783 | 420.40 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 796 | 420.58 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 908 | 422.71 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 919 | 422.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 18 |
| 920 | 422.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 929 | 422.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 930 | 422.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 941 | 423.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 942 | 423.10 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 943 | 423.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 972 | 423.23 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 19 | 9 |
| 989 | 423.53 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 13 |