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Os09g0400000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cinnamyl alcohol dehydrogenase (EC 1.1.1.195).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0374) R2 : 0.787
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -4.96 (0.121) R2dE : 0.786 R2E : 0.781
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.242 (0.0789) R2dN8 : 0.00558 R2N8 : 0.00118
σ : 0.704
deviance : 228.23
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C
peak time of C : --
E
wheather : humidity
threshold : 150.1
memory length : 915
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 14.6
open length of G : 14.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
203.41 0.67 11.5 -0.66 2.8 -2.47 1.66 -1.07 0.125 18.5 95.85 852 16.4 4.4
204 0.665 11.5 -0.526 2.72 -2.61 1.56 -- 0.167 18.8 100.2 844 16.3 4.7
208.92 0.673 11.5 -0.651 2.77 -2.49 -- -1.01 0.164 18.6 98.86 855 16.3 4.41
208.61 0.673 11.5 -0.579 2.74 -2.93 -- -- 0.143 19.2 104.6 849 16.2 4.5
218.52 0.688 11.4 -0.625 -- -4.67 -- -0.778 0.246 -- 154.4 886 14.6 15.2
340.92 0.866 11.5 -0.615 3.65 -- 1.5 -- 0.161 16.9 -- -- -- --
346.69 0.872 11.5 -0.61 3.66 -- -- -- 0.169 16.9 -- -- -- --
219.73 0.69 11.4 -0.587 -- -4.85 -- -- 0.201 -- 152.4 912 14.6 14.8
216.07 0.685 11.5 -- 2.67 -3.1 -- -- 0.162 19.7 109.9 838 16.2 4.77
1054.23 1.52 11.5 -0.746 -- -- -- -- 0.0742 -- -- -- -- --
356.52 0.883 11.5 -- 3.67 -- -- -- 0.237 16.9 -- -- -- --
228.23 0.704 11.4 -- -- -4.96 -- -- 0.242 -- 150.1 915 14.6 14.9
1068.9 1.53 11.4 -- -- -- -- -- 0.157 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 235.65 humidity 90.0 720 < th dose dependent rect. 18 4
6 238.93 temperature 15.0 90 > th dose dependent rect. 3 4
7 238.94 temperature 15.0 270 > th dose dependent rect. 3 2
8 239.09 wind 5.0 10 < th dose dependent rect. 4 5
10 239.66 wind 5.0 270 < th dose dependent rect. 3 2
12 239.88 humidity 50.0 720 > th dose dependent rect. 16 10
14 240.04 wind 3.0 270 < th dose independent rect. 3 2
17 240.57 wind 5.0 90 < th dose dependent rect. 3 4
18 240.66 temperature 25.0 720 > th dose dependent rect. 19 2
22 241.18 wind 5.0 90 < th dose dependent rect. 3 6
34 242.29 humidity 50.0 10 > th dose dependent rect. 8 20
37 242.53 precipitation 0.1 270 < th dose independent rect. 3 2
38 242.53 precipitation 0.1 270 < th dose dependent rect. 3 2
42 242.73 humidity 80.0 1440 < th dose dependent rect. 16 17
47 242.97 wind 3.0 10 < th dose independent rect. 4 5
62 244.30 wind 3.0 270 < th dose independent rect. 1 6
68 244.67 temperature 25.0 720 > th dose dependent rect. 18 14
80 245.16 humidity 80.0 1440 < th dose independent rect. 7 1
81 245.16 radiation 1.0 270 < th dose dependent rect. 5 21
110 246.63 wind 5.0 270 < th dose dependent rect. 1 6
127 247.13 temperature 30.0 1440 > th dose dependent rect. 15 21
129 247.18 temperature 30.0 1440 > th dose dependent sin 11 NA
170 248.16 temperature 30.0 1440 > th dose dependent rect. 15 4
188 248.29 radiation 1.0 270 < th dose independent rect. 5 21
192 248.36 temperature 15.0 10 > th dose dependent rect. 4 3
209 248.45 temperature 30.0 720 < th dose independent rect. 16 10
242 248.98 humidity 80.0 1440 < th dose dependent sin 12 NA
248 249.09 humidity 60.0 10 > th dose dependent rect. 18 10
262 249.24 temperature 30.0 1440 > th dose dependent rect. 10 9
325 249.45 temperature 30.0 1440 > th dose dependent no NA NA
435 249.71 humidity 80.0 1440 > th dose independent rect. 7 1
471 249.88 humidity 70.0 720 > th dose independent rect. 16 10
483 250.04 humidity 50.0 1440 < th dose independent rect. 16 1
487 250.15 humidity 50.0 1440 < th dose dependent rect. 16 1
494 250.30 radiation 20.0 1440 > th dose independent rect. 16 16
525 250.69 humidity 60.0 90 > th dose dependent rect. 18 9
543 250.89 humidity 50.0 1440 > th dose independent rect. 16 1
553 251.05 humidity 70.0 720 > th dose independent rect. 16 18
603 251.66 radiation 20.0 1440 > th dose dependent rect. 16 16
606 251.72 precipitation 0.1 270 < th dose independent rect. 2 16
607 251.72 precipitation 0.1 270 < th dose dependent rect. 2 16
615 251.85 temperature 30.0 1440 < th dose independent rect. 18 18
640 251.95 temperature 30.0 1440 > th dose independent rect. 17 19
642 251.97 humidity 50.0 10 > th dose dependent rect. 21 7
670 252.17 temperature 30.0 720 < th dose independent rect. 16 17
683 252.39 temperature 30.0 1440 > th dose dependent rect. 10 2
722 252.73 humidity 60.0 90 > th dose dependent rect. 21 6
736 252.91 humidity 80.0 720 > th dose dependent rect. 19 4
756 253.03 humidity 70.0 1440 < th dose independent sin 11 NA
766 253.14 temperature 30.0 1440 > th dose independent sin 11 NA
767 253.14 temperature 30.0 1440 < th dose independent sin 11 NA
770 253.18 humidity 50.0 270 > th dose dependent rect. 2 3
771 253.19 humidity 50.0 270 > th dose independent rect. 5 21
821 253.56 radiation 10.0 1440 > th dose dependent rect. 17 14
846 253.94 temperature 30.0 1440 > th dose independent rect. 9 3
847 253.95 precipitation 0.1 90 < th dose independent rect. 3 18
848 253.95 precipitation 0.1 90 < th dose dependent rect. 3 18
849 253.96 temperature 30.0 1440 < th dose independent rect. 9 1
866 254.13 wind 9.0 270 < th dose independent rect. 5 22
869 254.17 precipitation 0.1 10 < th dose independent rect. 4 17
871 254.17 precipitation 0.1 10 < th dose dependent rect. 4 17
908 254.43 humidity 60.0 1440 < th dose independent sin 13 NA
909 254.43 radiation 20.0 1440 < th dose independent rect. 16 16
913 254.44 humidity 50.0 1440 > th dose independent rect. 17 12
916 254.46 humidity 50.0 1440 < th dose independent rect. 16 19
929 254.58 temperature 20.0 90 > th dose independent rect. 3 4
946 254.65 radiation 1.0 270 < th dose independent rect. 3 2
951 254.71 radiation 10.0 270 < th dose dependent rect. 3 2
974 254.79 temperature 10.0 270 > th dose independent rect. 3 2
976 254.79 temperature 30.0 270 < th dose independent rect. 3 2
977 254.79 humidity 50.0 270 > th dose independent rect. 3 2
980 254.79 atmosphere 995.0 270 > th dose independent rect. 3 2
981 254.79 atmosphere 1010.0 270 < th dose independent rect. 3 2
986 254.79 temperature 10.0 270 > th dose independent rect. 5 22
991 254.82 temperature 25.0 1440 > th dose dependent rect. 6 1
992 254.82 humidity 50.0 1440 > th dose dependent rect. 6 17