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Os09g0397800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, unclassifiable transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.39 (0.075) R2 : 0.713
β1 : -1.87 (0.428) R2dD : 0.0527 R2D : 0.238
β2 : 1.23 (0.144) R2dC : 0.0467 R2C : 0.0373
β3 : -2.51 (0.225) R2dE : 0.114 R2E : 0.191
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 12.9 (1.4) R2dD*E : 0.228 R2D*E : 0.406
γ1 : -0.954 (0.155) R2dN8 : 0.0537 R2N8 : 0.057
σ : 1.05
deviance : 512.9
__
_____
C
peak time of C : 4.04
E
wheather : temperature
threshold : 26.6
memory length : 4595
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
498.23 1.05 7.37 -1.84 1.18 -2.42 2.51 12 -0.833 3.56 26.4 4735 -- --
522.91 1.07 7.59 -2.65 1.29 -3.09 2.8 -- -0.705 3.57 21.11 21768 -- --
512.9 1.05 7.39 -1.87 1.23 -2.51 -- 12.9 -0.954 4.04 26.6 4595 -- --
537.32 1.08 7.62 -2.97 1.33 -2.93 -- -- -0.848 4.01 21.2 21289 -- --
590.3 1.13 7.37 -1.65 -- -2.53 -- 13.1 -0.898 -- 27 4759 -- --
662.94 1.21 7.88 -5.78 1.25 -- 2.3 -- -2.01 3.83 -- -- -- --
677.8 1.22 7.88 -5.81 1.28 -- -- -- -2.03 4.17 -- -- -- --
633.24 1.17 7.64 -3.01 -- -2.83 -- -- -0.852 -- 21.4 21856 -- --
596.75 1.14 7.47 -- 1.33 -4.91 -- -- -0.19 4.01 18.51 47520 -- --
766.65 1.29 7.89 -5.76 -- -- -- -- -1.99 -- -- -- -- --
1566.69 1.85 7.74 -- 1.17 -- -- -- -1.38 4.26 -- -- -- --
693.57 1.23 7.48 -- -- -4.82 -- -- -0.165 -- 18.65 47520 -- --
1640.55 1.89 7.74 -- -- -- -- -- -1.35 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 480.15 radiation 20 43200 < th dose independent rect. 15 1
2 480.47 radiation 10 43200 < th dose independent rect. 15 17
4 481.25 radiation 40 43200 > th dose dependent rect. 13 19
5 481.28 radiation 10 43200 < th dose independent sin 13 NA
7 481.48 radiation 10 43200 < th dose independent rect. 15 6
8 481.48 radiation 10 43200 < th dose independent rect. 15 12
12 481.49 radiation 10 43200 < th dose independent rect. 15 10
14 481.51 radiation 10 43200 < th dose independent rect. 15 4
18 481.62 radiation 40 43200 > th dose dependent rect. 13 3
71 482.88 radiation 20 43200 > th dose dependent rect. 15 17
81 483.47 radiation 40 43200 < th dose independent rect. 13 19
82 483.63 radiation 10 43200 < th dose independent rect. 12 19
111 484.98 radiation 40 43200 < th dose independent rect. 13 14
113 484.99 radiation 40 43200 < th dose independent rect. 13 8
116 485.00 radiation 40 43200 < th dose independent rect. 13 12
121 485.03 radiation 40 43200 < th dose independent rect. 13 6
125 485.05 radiation 20 43200 > th dose independent rect. 16 16
136 485.11 radiation 10 43200 < th dose dependent rect. 18 14
142 485.16 radiation 40 43200 < th dose dependent rect. 15 17
169 485.67 radiation 40 43200 > th dose independent rect. 7 1
185 485.67 radiation 40 43200 > th dose dependent rect. 7 1
204 485.70 radiation 10 43200 < th dose dependent rect. 24 8
205 485.72 radiation 10 43200 < th dose dependent rect. 6 1
206 485.72 radiation 10 43200 < th dose dependent rect. 2 6
208 485.72 radiation 10 43200 < th dose dependent rect. 22 10
232 486.10 radiation 10 43200 < th dose independent rect. 6 2
256 486.37 radiation 10 43200 < th dose independent rect. 24 8
257 486.37 radiation 10 43200 < th dose independent rect. 20 12
260 486.38 radiation 10 43200 < th dose independent rect. 2 6
385 487.85 radiation 40 43200 > th dose dependent sin 13 NA
387 487.87 radiation 20 43200 > th dose dependent rect. 15 1
392 488.01 radiation 20 43200 > th dose dependent sin 13 NA
490 489.24 radiation 1 43200 > th dose dependent sin 13 NA
491 489.25 radiation 30 43200 < th dose independent rect. 6 3
493 489.28 radiation 30 43200 < th dose independent rect. 24 9
494 489.29 radiation 30 43200 < th dose independent rect. 2 7
496 489.30 radiation 30 43200 < th dose independent rect. 20 13
534 490.15 radiation 20 43200 > th dose dependent rect. 6 2
594 490.93 radiation 1 43200 > th dose dependent rect. 4 4
610 491.08 radiation 10 43200 < th dose independent no NA NA
611 491.08 radiation 10 43200 < th dose independent rect. 4 17
612 491.08 radiation 10 43200 < th dose independent rect. 2 18
635 491.08 radiation 10 43200 < th dose independent rect. 20 23
640 491.09 radiation 10 43200 < th dose independent rect. 4 15
661 491.16 radiation 30 43200 < th dose dependent sin 12 NA
662 491.17 radiation 10 43200 < th dose dependent sin 11 NA
720 491.29 radiation 40 43200 < th dose dependent rect. 24 8
723 491.32 radiation 40 43200 < th dose dependent rect. 2 6
942 493.06 radiation 40 43200 < th dose dependent rect. 7 1