Os09g0397400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os09g0397400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.91 | 0.401 | 6.21 | -0.743 | 0.356 | 0.165 | 0.124 | 3.97 | -0.277 | 18.5 | 30.09 | 1320 | -- | -- |
| 73.51 | 0.399 | 6.3 | -1.46 | 0.362 | 0.633 | -0.0951 | -- | -0.332 | 17.8 | 28.5 | 1274 | -- | -- |
| 72.94 | 0.398 | 6.21 | -0.745 | 0.357 | 0.165 | -- | 3.98 | -0.277 | 18.4 | 30.18 | 1319 | -- | -- |
| 73.34 | 0.399 | 6.31 | -1.46 | 0.343 | 0.642 | -- | -- | -0.345 | 18.2 | 28.34 | 1271 | -- | -- |
| 78.03 | 0.411 | 6.23 | -0.835 | -- | 0.289 | -- | 4.28 | -0.286 | -- | 29.01 | 930 | -- | -- |
| 92.36 | 0.451 | 6.32 | -1.27 | 0.326 | -- | 0.207 | -- | -0.402 | 19.5 | -- | -- | -- | -- |
| 92.46 | 0.45 | 6.32 | -1.27 | 0.328 | -- | -- | -- | -0.401 | 19.3 | -- | -- | -- | -- |
| 78.08 | 0.412 | 6.31 | -1.48 | -- | 0.812 | -- | -- | -0.371 | -- | 28 | 1867 | -- | -- |
| 126.16 | 0.523 | 6.27 | -- | 0.355 | 0.42 | -- | -- | -0.165 | 18.4 | 30.6 | 1281 | -- | -- |
| 98.17 | 0.463 | 6.32 | -1.28 | -- | -- | -- | -- | -0.407 | -- | -- | -- | -- | -- |
| 135.15 | 0.544 | 6.29 | -- | 0.341 | -- | -- | -- | -0.259 | 19.1 | -- | -- | -- | -- |
| 131.22 | 0.534 | 6.26 | -- | -- | 0.566 | -- | -- | -0.179 | -- | 30.18 | 860 | -- | -- |
| 141.27 | 0.555 | 6.28 | -- | -- | -- | -- | -- | -0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.00 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 2 | 71.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 3 | 71.05 | humidity | 70 | 1440 | > th | dose independent | sin | 13 | NA |
| 8 | 71.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 9 | 71.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 10 | 71.35 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 11 | 71.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 12 | 71.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 19 | 71.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 36 | 71.55 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 92 | 71.89 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 98 | 72.04 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 102 | 72.08 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 107 | 72.14 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 147 | 72.43 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 148 | 72.43 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 153 | 72.45 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 185 | 72.51 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 198 | 72.55 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 205 | 72.58 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 209 | 72.59 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 248 | 72.70 | radiation | 10 | 1440 | > th | dose independent | sin | 14 | NA |
| 333 | 72.90 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 372 | 72.94 | temperature | 30 | 1440 | > th | dose dependent | sin | 19 | NA |
| 448 | 73.00 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 9 |
| 456 | 73.01 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 559 | 73.01 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 591 | 73.05 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 597 | 73.07 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 600 | 73.08 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 614 | 73.11 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 638 | 73.13 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 683 | 73.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 694 | 73.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 713 | 73.20 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 747 | 73.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 753 | 73.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 836 | 73.38 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 887 | 73.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 899 | 73.47 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 948 | 73.61 | radiation | 10 | 1440 | < th | dose dependent | sin | 14 | NA |
| 957 | 73.62 | radiation | 30 | 1440 | > th | dose dependent | rect. | 15 | 2 |