Os09g0397100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0397100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.01 | 0.262 | 9.28 | -0.886 | 0.363 | 1.41 | 0.149 | 3.86 | -0.082 | 1.89 | 0.9205 | 1423 | -- | -- |
| 36.03 | 0.28 | 9.22 | -0.492 | 0.371 | 0.705 | -0.0304 | -- | 0.00724 | 1.39 | 3.282 | 1388 | -- | -- |
| 31.07 | 0.26 | 9.28 | -0.895 | 0.348 | 1.41 | -- | 3.88 | -0.0845 | 2.02 | 0.8964 | 1427 | -- | -- |
| 36 | 0.279 | 9.22 | -0.497 | 0.368 | 0.715 | -- | -- | 0.00634 | 1.62 | 3.292 | 1390 | -- | -- |
| 34.74 | 0.275 | 9.28 | -0.813 | -- | 1.49 | -- | 3.77 | -0.0587 | -- | 0.9 | 1500 | -- | -- |
| 43.41 | 0.309 | 9.24 | -0.632 | 0.287 | -- | -0.103 | -- | -0.106 | 2.27 | -- | -- | -- | -- |
| 43.45 | 0.309 | 9.24 | -0.629 | 0.287 | -- | -- | -- | -0.105 | 2.29 | -- | -- | -- | -- |
| 36.27 | 0.28 | 9.22 | -0.566 | -- | 0.847 | -- | -- | -0.00754 | -- | 4.15 | 1637 | -- | -- |
| 42.14 | 0.302 | 9.21 | -- | 0.348 | 0.856 | -- | -- | 0.0272 | 2.15 | 2.67 | 1413 | -- | -- |
| 48.33 | 0.325 | 9.24 | -0.617 | -- | -- | -- | -- | -0.098 | -- | -- | -- | -- | -- |
| 53.87 | 0.343 | 9.23 | -- | 0.275 | -- | -- | -- | -0.035 | 2.25 | -- | -- | -- | -- |
| 42.69 | 0.304 | 9.2 | -- | -- | 1.03 | -- | -- | 0.0779 | -- | 2.748 | 1589 | -- | -- |
| 58.37 | 0.357 | 9.22 | -- | -- | -- | -- | -- | -0.0296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.59 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 3 | 28.81 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 4 | 28.86 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 5 | 28.87 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 18 | 29.05 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 21 | 29.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 37 | 29.18 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 45 | 29.23 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 56 | 29.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 61 | 29.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 62 | 29.30 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 72 | 29.33 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 80 | 29.35 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 91 | 29.38 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 103 | 29.42 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 106 | 29.42 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 107 | 29.43 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 117 | 29.44 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 155 | 29.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 180 | 29.56 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 14 | 11 |
| 195 | 29.58 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 207 | 29.60 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 226 | 29.62 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 279 | 29.69 | temperature | 20.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 308 | 29.72 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 327 | 29.74 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 401 | 29.82 | temperature | 20.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 411 | 29.82 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 443 | 29.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 451 | 29.87 | humidity | 90.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 454 | 29.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 11 |
| 455 | 29.87 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 465 | 29.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 470 | 29.89 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 471 | 29.89 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 484 | 29.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 507 | 29.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 514 | 29.93 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 536 | 29.95 | humidity | 90.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 556 | 29.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 591 | 29.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 18 |
| 605 | 29.99 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 637 | 30.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 643 | 30.02 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 686 | 30.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 700 | 30.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 715 | 30.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 735 | 30.09 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 736 | 30.09 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 740 | 30.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 759 | 30.11 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 776 | 30.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 789 | 30.12 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 1 | NA |
| 811 | 30.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 853 | 30.16 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 854 | 30.16 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 865 | 30.16 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 876 | 30.17 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 878 | 30.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 889 | 30.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 898 | 30.18 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 901 | 30.18 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 902 | 30.18 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 920 | 30.19 | temperature | 25.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 926 | 30.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 949 | 30.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |