Os09g0394900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Annexin-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0394900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Annexin-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.32 | 0.298 | 13.5 | -0.723 | 1.15 | 0.799 | -0.557 | 0.675 | -0.0985 | 13.9 | 79 | 1392 | -- | -- |
| 40.59 | 0.297 | 13.5 | -0.764 | 1.12 | 0.85 | -0.584 | -- | -0.108 | 13.9 | 79 | 1437 | -- | -- |
| 41.47 | 0.3 | 13.5 | -0.742 | 1.13 | 0.834 | -- | 0.651 | -0.102 | 13.9 | 78.93 | 1423 | -- | -- |
| 41.79 | 0.301 | 13.5 | -0.794 | 1.11 | 0.881 | -- | -- | -0.114 | 13.9 | 78.87 | 1440 | -- | -- |
| 74.65 | 0.405 | 13.5 | -0.87 | -- | 0.678 | -- | -0.321 | -0.0785 | -- | 78.93 | 1423 | -- | -- |
| 49.18 | 0.329 | 13.5 | -0.735 | 1.12 | -- | -0.665 | -- | -0.0715 | 13.9 | -- | -- | -- | -- |
| 50.89 | 0.334 | 13.5 | -0.755 | 1.11 | -- | -- | -- | -0.0755 | 13.8 | -- | -- | -- | -- |
| 75.31 | 0.406 | 13.5 | -0.86 | -- | 0.676 | -- | -- | -0.076 | -- | 78.93 | 1423 | -- | -- |
| 58.07 | 0.355 | 13.5 | -- | 1.11 | 0.809 | -- | -- | -0.0452 | 13.9 | 80.01 | 1465 | -- | -- |
| 126.18 | 0.525 | 13.5 | -0.801 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 65.93 | 0.38 | 13.5 | -- | 1.13 | -- | -- | -- | 0.00859 | 13.8 | -- | -- | -- | -- |
| 92.21 | 0.449 | 13.5 | -- | -- | 0.67 | -- | -- | -0.00486 | -- | 83 | 1684 | -- | -- |
| 143.11 | 0.558 | 13.5 | -- | -- | -- | -- | -- | -0.0121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 2 | 39.77 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 4 | 39.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 6 | 39.78 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 7 | 39.79 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 8 | 39.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 33 | 39.86 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 85 | 39.97 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 176 | 40.45 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 178 | 40.46 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 188 | 40.48 | humidity | 80 | 1440 | < th | dose dependent | sin | 11 | NA |
| 199 | 40.52 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 225 | 40.57 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 286 | 40.66 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 289 | 40.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 297 | 40.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 337 | 40.71 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 350 | 40.72 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 354 | 40.73 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 380 | 40.74 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 387 | 40.75 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 402 | 40.76 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 443 | 40.79 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 446 | 40.80 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 465 | 40.81 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 467 | 40.81 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 468 | 40.81 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 483 | 40.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 506 | 40.85 | wind | 5 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 524 | 40.86 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 561 | 40.87 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 618 | 40.93 | humidity | 60 | 1440 | > th | dose dependent | sin | 22 | NA |
| 828 | 41.08 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 966 | 41.16 | wind | 1 | 14400 | > th | dose dependent | rect. | 2 | 2 |