Os09g0394300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 9 protein.
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Os09g0394300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 9 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.57 | 0.476 | 9.46 | -0.644 | 0.747 | 0.678 | -0.649 | -4.32 | 0.117 | 11 | 20.98 | 4890 | -- | -- |
| 114.51 | 0.498 | 9.33 | 0.349 | 0.758 | 0.729 | -0.562 | -- | 0.305 | 11.2 | 17.9 | 10413 | -- | -- |
| 104.16 | 0.475 | 9.46 | -0.647 | 0.747 | 0.677 | -- | -4.22 | 0.12 | 10.8 | 20.92 | 4766 | -- | -- |
| 114.62 | 0.499 | 9.33 | 0.418 | 0.716 | 0.767 | -- | -- | 0.331 | 10.8 | 15.24 | 9260 | -- | -- |
| 129.4 | 0.533 | 9.38 | 0.0272 | -- | 0.99 | -- | -3.65 | 0.254 | -- | 19.42 | 4630 | -- | -- |
| 123.93 | 0.522 | 9.26 | 0.848 | 0.723 | -- | -0.631 | -- | 0.572 | 11.1 | -- | -- | -- | -- |
| 125.52 | 0.525 | 9.26 | 0.821 | 0.729 | -- | -- | -- | 0.568 | 10.8 | -- | -- | -- | -- |
| 141.38 | 0.556 | 9.31 | 0.607 | -- | 1.09 | -- | -- | 0.419 | -- | 12.09 | 11613 | -- | -- |
| 115.27 | 0.5 | 9.33 | -- | 0.78 | 1.03 | -- | -- | 0.244 | 10.9 | 12.11 | 10848 | -- | -- |
| 158.48 | 0.588 | 9.28 | 0.806 | -- | -- | -- | -- | 0.564 | -- | -- | -- | -- | -- |
| 143.28 | 0.56 | 9.28 | -- | 0.723 | -- | -- | -- | 0.477 | 10.8 | -- | -- | -- | -- |
| 149.22 | 0.569 | 9.36 | -- | -- | 0.981 | -- | -- | 0.21 | -- | 3.527 | 11683 | -- | -- |
| 175.6 | 0.619 | 9.3 | -- | -- | -- | -- | -- | 0.474 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.50 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 2 | 94.91 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 9 | 95.37 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 17 | 95.88 | radiation | 30 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 21 | 96.10 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 53 | 96.28 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 69 | 96.33 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 99 | 96.62 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 106 | 96.73 | radiation | 20 | 43200 | > th | dose independent | sin | 8 | NA |
| 117 | 96.85 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 122 | 96.91 | radiation | 1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 125 | 96.93 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 164 | 97.08 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 165 | 97.09 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 168 | 97.10 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 180 | 97.17 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 190 | 97.25 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 207 | 97.27 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 208 | 97.27 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 222 | 97.32 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 266 | 97.54 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 273 | 97.54 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 335 | 97.65 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 393 | 97.78 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 427 | 97.84 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 429 | 97.84 | humidity | 90 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 541 | 97.99 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 545 | 98.00 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 550 | 98.00 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 760 | 98.14 | radiation | 30 | 43200 | < th | dose dependent | sin | 6 | NA |
| 801 | 98.21 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 804 | 98.22 | radiation | 40 | 43200 | > th | dose independent | sin | 2 | NA |
| 948 | 98.34 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 950 | 98.35 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |