Os09g0392100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os09g0392100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.27 | 0.217 | 11.3 | 1.7 | 0.197 | -0.901 | 0.678 | 3.59 | 0.322 | 3.26 | 25.92 | 1710 | -- | -- |
| 24.39 | 0.23 | 11.3 | 0.949 | 0.256 | -0.537 | 0.682 | -- | 0.298 | 3.52 | 22.12 | 9017 | -- | -- |
| 22.74 | 0.222 | 11.3 | 1.69 | 0.196 | -0.906 | -- | 3.67 | 0.317 | 3.14 | 25.98 | 1730 | -- | -- |
| 25.55 | 0.235 | 11.3 | 0.884 | 0.268 | -0.505 | -- | -- | 0.293 | 3.83 | 25.7 | 8975 | -- | -- |
| 24.86 | 0.232 | 11.3 | 1.79 | -- | -0.979 | -- | 4.18 | 0.336 | -- | 26.1 | 1763 | -- | -- |
| 33.9 | 0.273 | 11.4 | 0.688 | 0.25 | -- | 0.624 | -- | 0.0905 | 3.85 | -- | -- | -- | -- |
| 35.02 | 0.277 | 11.4 | 0.679 | 0.256 | -- | -- | -- | 0.0869 | 4.15 | -- | -- | -- | -- |
| 28.7 | 0.25 | 11.3 | 0.87 | -- | -0.496 | -- | -- | 0.248 | -- | 25.94 | 7629 | -- | -- |
| 42.74 | 0.304 | 11.4 | -- | 0.262 | -0.33 | -- | -- | 0.072 | 3.93 | 28.1 | 7592 | -- | -- |
| 38.57 | 0.29 | 11.4 | 0.69 | -- | -- | -- | -- | 0.0937 | -- | -- | -- | -- | -- |
| 47.18 | 0.321 | 11.4 | -- | 0.269 | -- | -- | -- | 0.0113 | 4.1 | -- | -- | -- | -- |
| 44.73 | 0.313 | 11.4 | -- | -- | -0.534 | -- | -- | 0.0278 | -- | 25.94 | 7629 | -- | -- |
| 51.11 | 0.334 | 11.4 | -- | -- | -- | -- | -- | 0.0172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 2 | 21.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 5 | 21.66 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 41 | 21.89 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 236 | 22.48 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 244 | 22.50 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 273 | 22.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 344 | 22.82 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 358 | 22.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 363 | 22.87 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 365 | 22.87 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 393 | 22.90 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 13 |
| 397 | 22.91 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 405 | 22.92 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 446 | 22.99 | temperature | 25 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 466 | 23.02 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 467 | 23.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 498 | 23.05 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 508 | 23.06 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 518 | 23.06 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 539 | 23.08 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 540 | 23.08 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 543 | 23.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 551 | 23.09 | wind | 1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 572 | 23.11 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 584 | 23.12 | wind | 9 | 43200 | < th | dose dependent | sin | 3 | NA |
| 631 | 23.16 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 635 | 23.16 | temperature | 25 | 90 | > th | dose dependent | sin | 19 | NA |
| 636 | 23.16 | temperature | 25 | 270 | > th | dose dependent | sin | 22 | NA |
| 645 | 23.17 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 704 | 23.20 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 772 | 23.25 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 774 | 23.25 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 785 | 23.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 812 | 23.28 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 830 | 23.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 857 | 23.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 891 | 23.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 893 | 23.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 913 | 23.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 987 | 23.36 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 20 |