Os09g0392000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0392000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.92 | 0.23 | 11.7 | 0.419 | 0.655 | 0.994 | -0.653 | -0.615 | 0.34 | 13.7 | 27.6 | 1625 | -- | -- |
| 24.25 | 0.229 | 11.7 | 0.304 | 0.656 | 1.05 | -0.688 | -- | 0.319 | 13.7 | 26.77 | 1623 | -- | -- |
| 25.59 | 0.236 | 11.7 | 0.407 | 0.655 | 1.01 | -- | -0.613 | 0.34 | 13.8 | 27.43 | 1620 | -- | -- |
| 25.88 | 0.237 | 11.7 | 0.279 | 0.66 | 1.04 | -- | -- | 0.312 | 13.8 | 26.64 | 1640 | -- | -- |
| 45.01 | 0.312 | 11.7 | 0.603 | -- | 1.01 | -- | -1.16 | 0.346 | -- | 57.93 | 2471 | -- | -- |
| 39.58 | 0.295 | 11.8 | -0.0334 | 0.655 | -- | -0.634 | -- | 0.0783 | 13.7 | -- | -- | -- | -- |
| 41.16 | 0.3 | 11.8 | -0.0535 | 0.656 | -- | -- | -- | 0.0748 | 13.8 | -- | -- | -- | -- |
| 42.34 | 0.303 | 11.7 | 0.31 | -- | 1.25 | -- | -- | 0.284 | -- | 28.82 | 1058 | -- | -- |
| 27.54 | 0.244 | 11.7 | -- | 0.648 | 0.915 | -- | -- | 0.25 | 13.8 | 26.56 | 1605 | -- | -- |
| 67.29 | 0.383 | 11.8 | -0.0803 | -- | -- | -- | -- | 0.06 | -- | -- | -- | -- | -- |
| 41.24 | 0.3 | 11.8 | -- | 0.657 | -- | -- | -- | 0.0808 | 13.8 | -- | -- | -- | -- |
| 44.04 | 0.309 | 11.7 | -- | -- | 1.13 | -- | -- | 0.279 | -- | 28.7 | 1032 | -- | -- |
| 67.46 | 0.383 | 11.8 | -- | -- | -- | -- | -- | 0.0689 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 10 | 23.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 9 |
| 14 | 23.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 22 | 23.69 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 32 | 23.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 21 |
| 41 | 23.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 84 | 23.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 104 | 23.84 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 126 | 23.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 436 | 24.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 462 | 24.12 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 472 | 24.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 503 | 24.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 562 | 24.19 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 595 | 24.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 863 | 24.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 986 | 24.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 21 |