Os09g0387800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0387800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 244.97 | 0.735 | 3.63 | 1.83 | 0.636 | -1.93 | 0.735 | -4.16 | 0.632 | 8.48 | 24.9 | 3715 | -- | -- |
| 255.8 | 0.745 | 3.75 | 1.14 | 0.638 | -1.39 | 0.626 | -- | 0.52 | 8.72 | 35.03 | 2522 | -- | -- |
| 246.54 | 0.731 | 3.63 | 1.82 | 0.609 | -1.9 | -- | -4.06 | 0.631 | 8.43 | 24.9 | 3946 | -- | -- |
| 256.86 | 0.746 | 3.75 | 1.17 | 0.641 | -1.38 | -- | -- | 0.529 | 8.67 | 43.26 | 2527 | -- | -- |
| 265.01 | 0.758 | 3.64 | 1.82 | -- | -1.9 | -- | -4.11 | 0.649 | -- | 24.82 | 4248 | -- | -- |
| 293.08 | 0.803 | 3.69 | 1.69 | 0.585 | -- | 0.498 | -- | 0.811 | 7.85 | -- | -- | -- | -- |
| 293.79 | 0.803 | 3.69 | 1.71 | 0.587 | -- | -- | -- | 0.81 | 7.74 | -- | -- | -- | -- |
| 276.13 | 0.774 | 3.77 | 1.22 | -- | -1.46 | -- | -- | 0.53 | -- | 33.3 | 1437 | -- | -- |
| 252.01 | 0.739 | 3.85 | -- | 0.577 | -1.88 | -- | -- | 0.0946 | 8.05 | 57.15 | 34490 | -- | -- |
| 312.37 | 0.826 | 3.7 | 1.71 | -- | -- | -- | -- | 0.818 | -- | -- | -- | -- | -- |
| 370.45 | 0.9 | 3.73 | -- | 0.6 | -- | -- | -- | 0.62 | 7.54 | -- | -- | -- | -- |
| 271.03 | 0.767 | 3.86 | -- | -- | -1.86 | -- | -- | 0.107 | -- | 33 | 34590 | -- | -- |
| 389.76 | 0.921 | 3.74 | -- | -- | -- | -- | -- | 0.628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 2 | 234.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 6 | 234.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 7 | 234.83 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 12 | 235.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 13 | 235.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 14 | 235.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 18 | 235.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 22 | 235.74 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 26 | 236.11 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 36 | 236.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 38 | 236.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 39 | 236.23 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 55 | 236.63 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 71 | 237.60 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 86 | 238.10 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 105 | 238.70 | radiation | 1 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 110 | 238.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 113 | 238.78 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 118 | 238.85 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 136 | 239.02 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 145 | 239.12 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 164 | 239.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 195 | 239.55 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 197 | 239.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 198 | 239.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 16 |
| 211 | 239.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 228 | 240.05 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 233 | 240.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 236 | 240.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 239 | 240.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 15 |
| 240 | 240.12 | radiation | 1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 241 | 240.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 9 |
| 349 | 240.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 17 |
| 448 | 240.85 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 502 | 241.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 507 | 241.17 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 517 | 241.23 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 564 | 241.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 574 | 241.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 20 |
| 577 | 241.42 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 14 |
| 584 | 241.43 | humidity | 90 | 43200 | > th | dose dependent | sin | 9 | NA |
| 626 | 241.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 692 | 241.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 710 | 241.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 9 |
| 718 | 241.60 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 723 | 241.61 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 946 | 241.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 1 |