Os09g0386600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0386600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.85 | 0.273 | 9.51 | 0.114 | 0.38 | 0.453 | 0.0863 | 0.654 | 0.113 | 23.7 | 67.04 | 1396 | -- | -- |
| 34.36 | 0.273 | 9.5 | 0.182 | 0.366 | 0.473 | 0.0749 | -- | 0.122 | 23.6 | 65.55 | 1430 | -- | -- |
| 33.88 | 0.271 | 9.51 | 0.111 | 0.378 | 0.452 | -- | 0.661 | 0.113 | 23.7 | 66.99 | 1404 | -- | -- |
| 34.38 | 0.273 | 9.5 | 0.179 | 0.358 | 0.478 | -- | -- | 0.127 | 23.6 | 65.86 | 1441 | -- | -- |
| 41.34 | 0.299 | 9.49 | 0.132 | -- | 0.52 | -- | 0.359 | 0.129 | -- | 67.41 | 1585 | -- | -- |
| 38.38 | 0.29 | 9.52 | 0.184 | 0.362 | -- | 0.0435 | -- | 0.0768 | 23.4 | -- | -- | -- | -- |
| 38.38 | 0.29 | 9.52 | 0.182 | 0.362 | -- | -- | -- | 0.0765 | 23.5 | -- | -- | -- | -- |
| 41.44 | 0.301 | 9.5 | 0.182 | -- | 0.298 | -- | -- | 0.0987 | -- | 65.66 | 1599 | -- | -- |
| 35.24 | 0.276 | 9.51 | -- | 0.351 | 0.497 | -- | -- | 0.112 | 23.4 | 67.9 | 1486 | -- | -- |
| 46.62 | 0.319 | 9.51 | 0.192 | -- | -- | -- | -- | 0.0804 | -- | -- | -- | -- | -- |
| 39.26 | 0.293 | 9.52 | -- | 0.364 | -- | -- | -- | 0.0562 | 23.5 | -- | -- | -- | -- |
| 42.31 | 0.304 | 9.51 | -- | -- | 0.301 | -- | -- | 0.0788 | -- | 65.66 | 1599 | -- | -- |
| 47.59 | 0.322 | 9.51 | -- | -- | -- | -- | -- | 0.0591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 31.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 6 | 31.90 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 15 | 32.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 22 | 32.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 13 |
| 25 | 32.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 13 |
| 26 | 32.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 13 |
| 28 | 32.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 29 | 32.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 30 | 32.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 32 | 32.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 13 |
| 36 | 32.44 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 37 | 32.44 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 46 | 32.48 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 47 | 32.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 48 | 32.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 50 | 32.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 64 | 32.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 65 | 32.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 75 | 32.59 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 79 | 32.60 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 88 | 32.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 90 | 32.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 97 | 32.63 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 112 | 32.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 131 | 32.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 138 | 32.72 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 140 | 32.73 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 143 | 32.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 154 | 32.76 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 167 | 32.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 169 | 32.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 176 | 32.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 188 | 32.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 209 | 32.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 220 | 32.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 245 | 32.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 248 | 32.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 8 |
| 254 | 32.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 8 |
| 257 | 32.90 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 262 | 32.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 276 | 32.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 302 | 32.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 363 | 33.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 366 | 33.01 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 367 | 33.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 376 | 33.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 408 | 33.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 424 | 33.06 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 434 | 33.08 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 6 | NA |
| 458 | 33.11 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 461 | 33.11 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 481 | 33.14 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 486 | 33.14 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 493 | 33.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 496 | 33.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 512 | 33.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 520 | 33.17 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 521 | 33.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 525 | 33.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 635 | 33.27 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 721 | 33.35 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 748 | 33.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 751 | 33.37 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 766 | 33.39 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 786 | 33.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 803 | 33.41 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 816 | 33.42 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 824 | 33.43 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 835 | 33.43 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 836 | 33.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 846 | 33.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 878 | 33.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 894 | 33.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 940 | 33.50 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 962 | 33.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 965 | 33.51 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |