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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0385900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.35 (0.038) R2 : 0.531
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.982 (0.0906) R2dC : 0.124 R2C : 0.152
β3 : -1.3 (0.104) R2dE : 0.21 R2E : 0.341
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.57 (0.0874) R2dN8 : 0.0713 R2N8 : 0.152
σ : 0.694
deviance : 221.89
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_____
C
peak time of C : 22.2
E
wheather : temperature
threshold : 23.66
memory length : 2152
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
221.39 0.699 5.36 -0.0268 0.981 -1.29 0.12 0.37 0.551 22.2 23.7 2168 -- --
221.58 0.693 5.35 0.118 0.991 -1.27 0.104 -- 0.595 22.2 23.61 2136 -- --
221.43 0.693 5.36 -0.0199 0.981 -1.29 -- 0.341 0.554 22.2 23.7 2152 -- --
221.61 0.693 5.35 0.109 0.985 -1.28 -- -- 0.592 22.2 23.6 2152 -- --
255.84 0.745 5.38 -0.211 -- -1.56 -- 0.687 0.401 -- 24.2 792 -- --
287.43 0.795 5.23 0.658 1.15 -- 0.156 -- 1.14 22.4 -- -- -- --
287.53 0.794 5.23 0.652 1.15 -- -- -- 1.14 22.4 -- -- -- --
255.77 0.745 5.34 0.14 -- -1.61 -- -- 0.514 -- 24.8 822 -- --
221.89 0.694 5.35 -- 0.982 -1.3 -- -- 0.57 22.2 23.66 2152 -- --
368.33 0.897 5.2 0.671 -- -- -- -- 1.15 -- -- -- -- --
298.74 0.809 5.24 -- 1.15 -- -- -- 1.07 22.4 -- -- -- --
255.95 0.745 5.34 -- -- -1.61 -- -- 0.516 -- 24.69 801 -- --
380.2 0.91 5.21 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 221.28 temperature 30 1440 < th dose dependent rect. 20 2
3 221.38 temperature 10 1440 > th dose dependent rect. 20 3
95 224.30 temperature 10 1440 > th dose dependent rect. 16 16
101 224.37 temperature 25 270 < th dose dependent rect. 23 23
125 224.55 temperature 25 270 < th dose dependent rect. 12 23
128 224.60 temperature 10 1440 > th dose dependent sin 14 NA
129 224.60 temperature 30 1440 < th dose dependent rect. 16 17
134 224.64 temperature 30 1440 < th dose dependent rect. 16 20
154 224.71 temperature 25 270 < th dose dependent rect. 10 23
172 224.79 temperature 30 1440 < th dose dependent sin 14 NA
213 224.97 radiation 1 43200 > th dose independent rect. 18 11
240 225.03 temperature 25 270 < th dose dependent rect. 5 23
241 225.04 temperature 25 270 < th dose dependent no NA NA
275 225.16 temperature 25 270 < th dose dependent rect. 15 23
282 225.20 temperature 30 1440 < th dose dependent rect. 3 21
289 225.21 temperature 30 1440 < th dose dependent rect. 11 22
333 225.33 temperature 20 14400 < th dose dependent rect. 4 1
338 225.33 temperature 30 720 < th dose dependent rect. 9 20
379 225.41 temperature 25 720 < th dose dependent rect. 6 18
382 225.42 temperature 30 1440 < th dose dependent no NA NA
553 225.80 temperature 25 270 < th dose dependent rect. 3 23
631 225.97 radiation 1 43200 > th dose independent rect. 18 1
661 226.00 temperature 15 1440 > th dose dependent rect. 3 23
675 226.04 temperature 15 1440 > th dose dependent no NA NA
676 226.04 temperature 30 1440 < th dose dependent rect. 10 16
683 226.05 temperature 15 1440 > th dose dependent rect. 1 23
966 226.56 temperature 15 1440 > th dose dependent rect. 4 4
982 226.59 temperature 30 1440 < th dose dependent rect. 4 4