Os09g0385700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, AN1-type domain containing protein.
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Os09g0385700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, AN1-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.19 | 0.502 | 9.64 | -0.0454 | 1.02 | -0.948 | 0.0546 | -1.27 | -0.339 | 17.4 | 21 | 1302 | -- | -- |
| 117.21 | 0.504 | 9.59 | 0.199 | 1.01 | -0.748 | 0.0516 | -- | -0.258 | 17.4 | 21.7 | 1326 | -- | -- |
| 114.19 | 0.498 | 9.64 | -0.0466 | 1.02 | -0.948 | -- | -1.28 | -0.34 | 17.4 | 20.99 | 1306 | -- | -- |
| 117.18 | 0.504 | 9.6 | 0.182 | 1.02 | -0.731 | -- | -- | -0.261 | 17.5 | 21.77 | 1271 | -- | -- |
| 167.77 | 0.603 | 9.63 | -0.0036 | -- | -1.03 | -- | -1.2 | -0.336 | -- | 20.8 | 1283 | -- | -- |
| 134.65 | 0.544 | 9.65 | -0.111 | 1.04 | -- | 0.0255 | -- | -0.486 | 17.3 | -- | -- | -- | -- |
| 134.65 | 0.543 | 9.65 | -0.111 | 1.04 | -- | -- | -- | -0.486 | 17.3 | -- | -- | -- | -- |
| 169.97 | 0.607 | 9.59 | 0.124 | -- | -0.766 | -- | -- | -0.282 | -- | 22 | 1279 | -- | -- |
| 117.6 | 0.505 | 9.6 | -- | 1.01 | -0.672 | -- | -- | -0.273 | 17.4 | 22 | 1283 | -- | -- |
| 191.04 | 0.646 | 9.63 | -0.147 | -- | -- | -- | -- | -0.512 | -- | -- | -- | -- | -- |
| 134.98 | 0.543 | 9.64 | -- | 1.04 | -- | -- | -- | -0.474 | 17.3 | -- | -- | -- | -- |
| 170.31 | 0.608 | 9.58 | -- | -- | -0.73 | -- | -- | -0.288 | -- | 22.01 | 1280 | -- | -- |
| 191.61 | 0.646 | 9.63 | -- | -- | -- | -- | -- | -0.496 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.47 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 17 |
| 4 | 113.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 6 | 113.94 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 7 | 113.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 35 | 115.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 47 | 115.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 56 | 115.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 70 | 116.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 74 | 116.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 90 | 116.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 95 | 116.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 109 | 116.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 129 | 116.59 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 173 | 116.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 14 |
| 174 | 116.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 183 | 116.75 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 187 | 116.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 268 | 116.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 275 | 116.88 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 308 | 116.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 317 | 116.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 371 | 117.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 381 | 117.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 415 | 117.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 22 |
| 425 | 117.05 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 434 | 117.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 467 | 117.10 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 480 | 117.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 584 | 117.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 700 | 117.31 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 742 | 117.35 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 961 | 117.54 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 979 | 117.56 | temperature | 25 | 10 | < th | dose independent | rect. | 5 | 16 |