Os09g0384900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os09g0384900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.19 | 0.451 | 2.84 | -0.126 | 0.0829 | 0.318 | -0.752 | -1.12 | -0.0474 | 19.1 | 3.101 | 15 | -- | -- |
| 92.63 | 0.452 | 2.82 | -0.112 | 0.00966 | 0.273 | -0.648 | -- | -0.0258 | 21.4 | 3.101 | 15 | -- | -- |
| 92.2 | 0.451 | 2.83 | -0.134 | 0.154 | 0.436 | -- | -0.977 | -0.0292 | 16.6 | 3.101 | 15 | -- | -- |
| 93.66 | 0.454 | 2.82 | -0.106 | 0.125 | 0.36 | -- | -- | -0.0182 | 16.3 | 3.101 | 15 | -- | -- |
| 92.85 | 0.451 | 2.83 | -0.11 | -- | 0.326 | -- | -0.976 | -0.0367 | -- | 2.8 | 15 | -- | -- |
| 94.9 | 0.457 | 2.82 | -0.0395 | 0.00521 | -- | 0.607 | -- | -0.0368 | 9.23 | -- | -- | -- | -- |
| 96.1 | 0.459 | 2.82 | -0.0197 | 0.0452 | -- | -- | -- | -0.0374 | 3.84 | -- | -- | -- | -- |
| 94.1 | 0.454 | 2.82 | -0.0815 | -- | 0.246 | -- | -- | -0.0286 | -- | 3.473 | 7 | -- | -- |
| 93.93 | 0.454 | 2.81 | -- | 0.111 | 0.327 | -- | -- | -0.00899 | 16.3 | 3.101 | 15 | -- | -- |
| 96.21 | 0.458 | 2.82 | -0.0178 | -- | -- | -- | -- | -0.0362 | -- | -- | -- | -- | -- |
| 96.11 | 0.459 | 2.82 | -- | 0.0448 | -- | -- | -- | -0.0352 | 3.84 | -- | -- | -- | -- |
| 94.21 | 0.454 | 2.81 | -- | -- | 0.237 | -- | -- | -0.0206 | -- | 3.3 | 2 | -- | -- |
| 96.22 | 0.458 | 2.82 | -- | -- | -- | -- | -- | -0.0342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.00 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 80.49 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 3 | 81.65 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 10 | 81.65 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 29 | 81.92 | humidity | 90.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 30 | 81.99 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 47 | 85.57 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 51 | 85.74 | wind | 3.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 70 | 85.95 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 85 | 86.29 | humidity | 90.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 91 | 86.55 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 93 | 86.58 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 99 | 86.65 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 118 | 87.15 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 16 |
| 144 | 87.43 | wind | 3.0 | 10 | < th | dose independent | rect. | 17 | 4 |
| 153 | 87.59 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 165 | 87.67 | humidity | 90.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 245 | 88.44 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 251 | 88.52 | wind | 3.0 | 10 | < th | dose dependent | rect. | 17 | 4 |
| 290 | 88.68 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 305 | 88.74 | wind | 3.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 325 | 88.85 | wind | 3.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 350 | 88.95 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 364 | 88.98 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 366 | 88.99 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 370 | 89.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 374 | 89.02 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 381 | 89.04 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 387 | 89.05 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 393 | 89.06 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 403 | 89.08 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 409 | 89.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 411 | 89.09 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 412 | 89.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 415 | 89.09 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 417 | 89.09 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 419 | 89.09 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 424 | 89.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 425 | 89.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 427 | 89.09 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 432 | 89.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 449 | 89.18 | temperature | 20.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 462 | 89.23 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 521 | 89.39 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 528 | 89.43 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 534 | 89.46 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 12 | 2 |
| 557 | 89.48 | humidity | 50.0 | 30 | < th | dose independent | rect. | 12 | 2 |
| 664 | 89.55 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 736 | 89.64 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 829 | 89.72 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 962 | 89.93 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 8 | 13 |
| 966 | 89.95 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 967 | 89.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 970 | 89.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 975 | 89.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 984 | 89.95 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 985 | 89.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |