Os09g0381100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xanthine/uracil/vitamin C permease family protein.
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Os09g0381100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xanthine/uracil/vitamin C permease family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.68 | 0.277 | 11.1 | -0.796 | 0.698 | 0.688 | -0.0521 | -0.0429 | 0.114 | 1.86 | 20 | 10 | -- | -- |
| 34.68 | 0.274 | 11.1 | -0.796 | 0.703 | 0.683 | -0.0859 | -- | 0.113 | 1.84 | 20 | 9 | -- | -- |
| 34.68 | 0.274 | 11.1 | -0.794 | 0.699 | 0.686 | -- | -0.0694 | 0.115 | 1.83 | 20 | 9 | -- | -- |
| 34.64 | 0.274 | 11.1 | -0.789 | 0.698 | 0.692 | -- | -- | 0.108 | 1.82 | 20.03 | 7 | -- | -- |
| 45.02 | 0.312 | 11.1 | -0.772 | -- | 1.15 | -- | -0.121 | 0.143 | -- | 18.31 | 12 | -- | -- |
| 43.06 | 0.308 | 11.1 | -0.812 | 1.36 | -- | -0.0168 | -- | 0.105 | 0.904 | -- | -- | -- | -- |
| 43.06 | 0.307 | 11.1 | -0.811 | 1.36 | -- | -- | -- | 0.106 | 0.904 | -- | -- | -- | -- |
| 44.38 | 0.31 | 11 | -0.785 | -- | 1.15 | -- | -- | 0.199 | -- | 16.93 | 51 | -- | -- |
| 51.13 | 0.333 | 11.1 | -- | 0.708 | 0.686 | -- | -- | 0.195 | 1.75 | 21.78 | 6 | -- | -- |
| 158.65 | 0.589 | 11.1 | -0.761 | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
| 60.4 | 0.364 | 11.1 | -- | 1.35 | -- | -- | -- | 0.196 | 0.878 | -- | -- | -- | -- |
| 59.9 | 0.36 | 11 | -- | -- | 1.16 | -- | -- | 0.281 | -- | 17.94 | 48 | -- | -- |
| 173.92 | 0.616 | 11 | -- | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.04 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 4 | 31.37 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 2 | 18 |
| 18 | 31.73 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 22 | 31.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 23 | 31.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 24 | 31.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 25 | 31.82 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 20 | 6 |
| 26 | 31.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 38 | 31.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 39 | 31.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 40 | 31.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 43 | 32.03 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 2 | 18 |
| 47 | 32.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 63 | 32.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 70 | 32.34 | temperature | 10.0 | 90 | > th | dose independent | rect. | 20 | 6 |
| 71 | 32.34 | temperature | 30.0 | 90 | < th | dose independent | rect. | 20 | 6 |
| 72 | 32.34 | humidity | 50.0 | 90 | > th | dose independent | rect. | 20 | 6 |
| 75 | 32.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 20 | 6 |
| 76 | 32.34 | radiation | 1.0 | 90 | < th | dose independent | rect. | 20 | 6 |
| 81 | 32.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 6 |
| 82 | 32.34 | temperature | 10.0 | 90 | > th | dose independent | rect. | 2 | 18 |
| 83 | 32.34 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 2 | 18 |
| 84 | 32.34 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 6 |
| 89 | 32.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 6 |
| 90 | 32.35 | wind | 9.0 | 90 | < th | dose independent | rect. | 20 | 6 |
| 116 | 32.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 118 | 32.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 124 | 32.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 131 | 32.49 | radiation | 10.0 | 90 | < th | dose independent | rect. | 2 | 18 |
| 136 | 32.52 | wind | 9.0 | 90 | < th | dose independent | rect. | 2 | 18 |
| 165 | 32.60 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 170 | 32.64 | wind | 9.0 | 90 | < th | dose dependent | rect. | 20 | 6 |
| 175 | 32.66 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 181 | 32.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 185 | 32.70 | wind | 9.0 | 90 | < th | dose dependent | rect. | 2 | 18 |
| 198 | 32.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 201 | 32.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 205 | 32.77 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 211 | 32.77 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 212 | 32.77 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 232 | 32.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 253 | 32.78 | radiation | 40.0 | 90 | < th | dose independent | rect. | 2 | 18 |
| 261 | 32.78 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 264 | 32.79 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 268 | 32.80 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 18 |
| 271 | 32.80 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 304 | 32.88 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 323 | 32.95 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 538 | 33.22 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 21 | 2 |
| 563 | 33.24 | radiation | 10.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 649 | 33.32 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 20 | 6 |
| 665 | 33.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 706 | 33.40 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 711 | 33.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 791 | 33.57 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 793 | 33.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 833 | 33.62 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 20 | 6 |
| 834 | 33.62 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 882 | 33.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 896 | 33.70 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 7 |
| 951 | 33.82 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 967 | 33.85 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |