Os09g0380400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0380400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.38 | 0.217 | 9.51 | -0.186 | 0.652 | -0.261 | 0.0742 | 1.03 | -0.0499 | 0.00803 | 19.17 | 1627 | -- | -- |
| 22.25 | 0.22 | 9.48 | -0.101 | 0.616 | -0.42 | 0.242 | -- | -0.0325 | 23.9 | 18.7 | 2382 | -- | -- |
| 21.38 | 0.215 | 9.51 | -0.189 | 0.652 | -0.263 | -- | 1.06 | -0.0496 | 0.0272 | 19.06 | 1632 | -- | -- |
| 21.93 | 0.218 | 9.48 | -0.0925 | 0.622 | -0.68 | -- | -- | -0.022 | 23.9 | 17.2 | 3334 | -- | -- |
| 46.14 | 0.316 | 9.53 | -0.314 | -- | -0.337 | -- | 1.15 | -0.0948 | -- | 18.3 | 2403 | -- | -- |
| 25.71 | 0.238 | 9.47 | 0.0957 | 0.646 | -- | 0.119 | -- | 0.0472 | 0.0194 | -- | -- | -- | -- |
| 25.77 | 0.238 | 9.47 | 0.0908 | 0.645 | -- | -- | -- | 0.0465 | 0.0542 | -- | -- | -- | -- |
| 45.72 | 0.315 | 9.48 | -0.0972 | -- | -0.514 | -- | -- | -0.0576 | -- | 19.8 | 878 | -- | -- |
| 22.17 | 0.219 | 9.48 | -- | 0.639 | -0.588 | -- | -- | -0.00919 | 0.00252 | 17.29 | 3284 | -- | -- |
| 51.99 | 0.337 | 9.45 | 0.111 | -- | -- | -- | -- | 0.0557 | -- | -- | -- | -- | -- |
| 25.99 | 0.238 | 9.47 | -- | 0.647 | -- | -- | -- | 0.0364 | 0.0621 | -- | -- | -- | -- |
| 45.86 | 0.315 | 9.48 | -- | -- | -0.508 | -- | -- | -0.0416 | -- | 19.6 | 858 | -- | -- |
| 52.31 | 0.338 | 9.46 | -- | -- | -- | -- | -- | 0.0434 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.73 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 6 | 21.04 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 8 | 21.07 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 10 | 21.09 | temperature | 20.0 | 720 | > th | dose independent | sin | 15 | NA |
| 17 | 21.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 17 |
| 20 | 21.14 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 21 | 21.15 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 37 | 21.18 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 39 | 21.18 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 56 | 21.21 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 59 | 21.21 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 76 | 21.23 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 100 | 21.26 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 126 | 21.31 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 145 | 21.34 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 167 | 21.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 169 | 21.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 174 | 21.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 176 | 21.37 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 177 | 21.37 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 181 | 21.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 182 | 21.38 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 194 | 21.39 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 198 | 21.40 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 204 | 21.40 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 212 | 21.40 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 214 | 21.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 218 | 21.41 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 226 | 21.41 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 228 | 21.42 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 229 | 21.42 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 234 | 21.42 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 12 |
| 251 | 21.43 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 267 | 21.44 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 270 | 21.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 298 | 21.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 313 | 21.47 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 317 | 21.48 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 324 | 21.48 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 329 | 21.48 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 7 | 14 |
| 346 | 21.49 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 348 | 21.49 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 356 | 21.50 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 365 | 21.50 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 388 | 21.51 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 400 | 21.52 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 402 | 21.52 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 403 | 21.52 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 404 | 21.52 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 405 | 21.52 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 424 | 21.52 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 437 | 21.53 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 454 | 21.53 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 456 | 21.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 465 | 21.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 512 | 21.56 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 523 | 21.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 525 | 21.56 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 530 | 21.57 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 531 | 21.57 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 537 | 21.57 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 546 | 21.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 556 | 21.58 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 574 | 21.58 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 14 |
| 603 | 21.59 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 620 | 21.60 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 637 | 21.60 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 15 |
| 642 | 21.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 656 | 21.61 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 658 | 21.61 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 659 | 21.61 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 660 | 21.61 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 676 | 21.61 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 689 | 21.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 690 | 21.62 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 694 | 21.62 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 696 | 21.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 736 | 21.63 | temperature | 20.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 738 | 21.63 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 739 | 21.63 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 740 | 21.63 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 752 | 21.63 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 762 | 21.63 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 766 | 21.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 788 | 21.64 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 805 | 21.65 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 833 | 21.66 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 835 | 21.66 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 839 | 21.66 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 849 | 21.66 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 851 | 21.66 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 23 | 7 |
| 852 | 21.66 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 853 | 21.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 854 | 21.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 895 | 21.67 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 932 | 21.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 987 | 21.69 | temperature | 20.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 988 | 21.69 | temperature | 20.0 | 1440 | < th | dose independent | sin | 16 | NA |