Os09g0379900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-glucan binding protein.
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Os09g0379900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-glucan binding protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.54 | 0.507 | 5.85 | 0.367 | 1.13 | -0.324 | 0.985 | 8.31 | -0.0491 | 9.55 | 27.9 | 3348 | -- | -- |
| 121.54 | 0.513 | 6.05 | -1.26 | 1.16 | 0.684 | 0.948 | -- | -0.208 | 9.38 | 29.8 | 3432 | -- | -- |
| 119.79 | 0.51 | 5.85 | 0.401 | 1.13 | -0.356 | -- | 8.41 | -0.0577 | 9.31 | 28.09 | 3329 | -- | -- |
| 123.71 | 0.518 | 6.02 | -1.15 | 1.16 | 0.651 | -- | -- | -0.185 | 9.29 | 30.5 | 3362 | -- | -- |
| 193.15 | 0.647 | 5.85 | 0.74 | -- | -0.517 | -- | 8.58 | 0.0293 | -- | 27.57 | 3025 | -- | -- |
| 134.73 | 0.544 | 6.04 | -1.03 | 1.13 | -- | 0.814 | -- | -0.291 | 9.35 | -- | -- | -- | -- |
| 136.92 | 0.548 | 6.04 | -0.999 | 1.13 | -- | -- | -- | -0.291 | 9.15 | -- | -- | -- | -- |
| 198.24 | 0.656 | 6.13 | -1.49 | -- | 0.636 | -- | -- | -0.55 | -- | 30.41 | 38938 | -- | -- |
| 156.94 | 0.583 | 6 | -- | 1.15 | 0.435 | -- | -- | -0.101 | 9.29 | 30.62 | 3360 | -- | -- |
| 211.42 | 0.679 | 6.07 | -1 | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
| 163.22 | 0.598 | 6.02 | -- | 1.13 | -- | -- | -- | -0.18 | 9.21 | -- | -- | -- | -- |
| 220.18 | 0.691 | 6.08 | -- | -- | -0.491 | -- | -- | -0.317 | -- | 35.66 | 41487 | -- | -- |
| 237.91 | 0.72 | 6.05 | -- | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.63 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 3 | 112.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 13 | 15 |
| 7 | 113.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 9 | 113.18 | temperature | 30.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 17 | 113.44 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 46 | 114.17 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 48 | 114.33 | temperature | 30.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 81 | 114.91 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 14 |
| 85 | 114.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 86 | 114.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 94 | 115.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 95 | 115.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 96 | 115.09 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 97 | 115.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 98 | 115.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 101 | 115.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 107 | 115.22 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 119 | 115.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 126 | 115.49 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 138 | 115.67 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 150 | 115.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 157 | 115.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 169 | 115.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 170 | 115.94 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 174 | 115.96 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 191 | 116.09 | temperature | 10.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 192 | 116.09 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 193 | 116.10 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 3 |
| 194 | 116.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 204 | 116.18 | temperature | 10.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 208 | 116.19 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 212 | 116.20 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 224 | 116.28 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 242 | 116.44 | temperature | 25.0 | 720 | < th | dose independent | sin | 15 | NA |
| 256 | 116.53 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 257 | 116.53 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 273 | 116.60 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 278 | 116.64 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 283 | 116.65 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 285 | 116.65 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 21 |
| 302 | 116.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 9 |
| 316 | 116.76 | temperature | 20.0 | 270 | > th | dose independent | sin | 4 | NA |
| 317 | 116.76 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 327 | 116.80 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 333 | 116.82 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 14 |
| 358 | 116.97 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 362 | 116.99 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 363 | 116.99 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 364 | 116.99 | temperature | 10.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 368 | 117.00 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 372 | 117.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 374 | 117.01 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 14 |
| 383 | 117.03 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 398 | 117.09 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 401 | 117.10 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 403 | 117.10 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 424 | 117.12 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 434 | 117.13 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 13 |
| 437 | 117.14 | temperature | 30.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 440 | 117.14 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 445 | 117.14 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 450 | 117.15 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 462 | 117.17 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 482 | 117.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 485 | 117.20 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 530 | 117.27 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 538 | 117.28 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 559 | 117.30 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 581 | 117.31 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 21 |
| 583 | 117.31 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 615 | 117.39 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 15 | 20 |
| 618 | 117.40 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 631 | 117.43 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 645 | 117.46 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 646 | 117.46 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 655 | 117.47 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 673 | 117.51 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 685 | 117.53 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 700 | 117.55 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 743 | 117.61 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 749 | 117.62 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 752 | 117.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 753 | 117.63 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 21 |
| 777 | 117.66 | temperature | 30.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 780 | 117.66 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 789 | 117.68 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 797 | 117.69 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 838 | 117.74 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 846 | 117.75 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 850 | 117.76 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 864 | 117.78 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 879 | 117.79 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 4 |
| 886 | 117.80 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 893 | 117.80 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 897 | 117.81 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 932 | 117.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 950 | 117.86 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 953 | 117.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 976 | 117.89 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |