Os09g0379600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
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Os09g0379600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Homeodomain-like containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283.23 | 0.791 | 10.5 | 1.52 | 0.668 | -1.09 | 1.27 | -9.69 | 0.0487 | 13.7 | 27.5 | 928 | 6.99 | -- |
| 319.09 | 0.832 | 10.5 | 2.48 | 0.628 | -1.35 | 2.24 | -- | -0.0311 | 14 | 29.5 | 1048 | 7.46 | -- |
| 289.36 | 0.792 | 10.5 | 1.54 | 0.638 | -1.13 | -- | -9.93 | 0.059 | 13.5 | 27.37 | 917 | 7.03 | -- |
| 301.92 | 0.809 | 10.4 | 2.94 | 0.585 | -2.18 | -- | -- | 0.117 | 14.3 | 27.62 | 888 | 6.99 | -- |
| 311.51 | 0.822 | 10.5 | 1.52 | -- | -1.43 | -- | -9.67 | 0.0437 | -- | 26.53 | 895 | 7.39 | -- |
| 440.07 | 0.983 | 10.3 | 2.51 | 1.11 | -- | 2.19 | -- | 0.383 | 13.6 | -- | -- | -- | -- |
| 459.22 | 1 | 10.3 | 2.58 | 1.11 | -- | -- | -- | 0.395 | 13.6 | -- | -- | -- | -- |
| 319.08 | 0.832 | 10.3 | 3.1 | -- | -2.45 | -- | -- | 0.237 | -- | 26.48 | 898 | 7.21 | -- |
| 531.47 | 1.07 | 10.4 | -- | 0.775 | -1.59 | -- | -- | -0.177 | 13.6 | 29.72 | 947 | 6.51 | -- |
| 534.5 | 1.08 | 10.3 | 2.54 | -- | -- | -- | -- | 0.371 | -- | -- | -- | -- | -- |
| 634.76 | 1.18 | 10.3 | -- | 1.06 | -- | -- | -- | 0.107 | 13.5 | -- | -- | -- | -- |
| 561.01 | 1.1 | 10.4 | -- | -- | -1.99 | -- | -- | -0.129 | -- | 27.1 | 897 | 6.9 | -- |
| 704.17 | 1.24 | 10.3 | -- | -- | -- | -- | -- | 0.0892 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 273.53 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 23 | 281.00 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 39 | 283.11 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 54 | 286.08 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 73 | 288.78 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 93 | 290.77 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 124 | 293.23 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 8 |
| 194 | 301.56 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 15 |
| 214 | 303.29 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 230 | 303.93 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 236 | 304.94 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 15 |
| 245 | 306.73 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 343 | 312.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 348 | 313.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 387 | 314.32 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 424 | 315.01 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 445 | 315.53 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 500 | 317.78 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 544 | 319.18 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 632 | 321.46 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 633 | 321.47 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 654 | 321.68 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 891 | 326.45 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 926 | 326.72 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |