Os09g0379500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0379500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.01 | 0.613 | 3.35 | 0.0378 | 0.249 | -0.148 | 0.299 | -2.29 | -0.0576 | 8.42 | 30 | 1252 | -- | -- |
| 170.61 | 0.608 | 3.31 | 0.437 | 0.249 | -0.379 | 0.148 | -- | -0.0724 | 7.92 | 30.32 | 1262 | -- | -- |
| 170.2 | 0.608 | 3.35 | 0.0394 | 0.253 | -0.149 | -- | -2.37 | -0.0602 | 7.8 | 30 | 1235 | -- | -- |
| 170.65 | 0.608 | 3.3 | 0.489 | 0.251 | -0.391 | -- | -- | -0.0496 | 7.87 | 30.5 | 1274 | -- | -- |
| 173.43 | 0.613 | 3.35 | 0.056 | -- | -0.189 | -- | -2.36 | -0.0621 | -- | 29.9 | 1162 | -- | -- |
| 178.56 | 0.626 | 3.28 | 0.361 | 0.253 | -- | 0.51 | -- | 0.0343 | 9.71 | -- | -- | -- | -- |
| 179.32 | 0.627 | 3.28 | 0.378 | 0.263 | -- | -- | -- | 0.0335 | 8.78 | -- | -- | -- | -- |
| 173.84 | 0.614 | 3.3 | 0.492 | -- | -0.446 | -- | -- | -0.026 | -- | 29.81 | 1188 | -- | -- |
| 176.92 | 0.62 | 3.3 | -- | 0.269 | -0.331 | -- | -- | -0.078 | 7.88 | 30.7 | 1248 | -- | -- |
| 183.26 | 0.633 | 3.29 | 0.378 | -- | -- | -- | -- | 0.0356 | -- | -- | -- | -- | -- |
| 183.09 | 0.633 | 3.29 | -- | 0.265 | -- | -- | -- | -0.0086 | 8.67 | -- | -- | -- | -- |
| 180.21 | 0.625 | 3.31 | -- | -- | -0.382 | -- | -- | -0.0882 | -- | 30.4 | 1106 | -- | -- |
| 187.04 | 0.638 | 3.3 | -- | -- | -- | -- | -- | -0.00643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.41 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 156.49 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 3 | 156.59 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 5 | 156.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 156.61 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 156.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 16 | 156.93 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 157.05 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 157.05 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 157.05 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 157.05 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 157.05 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 157.05 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 36 | 157.05 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 157.05 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 42 | 157.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 47 | 157.30 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 52 | 157.85 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 53 | 157.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 75 | 159.30 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 82 | 159.39 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 83 | 159.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 86 | 159.39 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 90 | 159.39 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 99 | 159.39 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 100 | 159.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 120 | 159.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 158 | 160.43 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 163 | 161.61 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 168 | 162.55 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 173 | 163.29 | temperature | 25.0 | 720 | > th | dose independent | rect. | 1 | 1 |
| 174 | 163.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 175 | 163.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 183 | 163.90 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 184 | 163.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 185 | 164.33 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 198 | 164.96 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 200 | 165.08 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 201 | 165.19 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 209 | 165.39 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 215 | 165.58 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 221 | 165.71 | wind | 1.0 | 30 | < th | dose independent | rect. | 13 | 14 |
| 229 | 165.99 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 235 | 166.14 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 264 | 166.54 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 273 | 166.65 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 277 | 166.66 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 278 | 166.66 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 279 | 166.67 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 296 | 166.80 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 300 | 166.83 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 4 |
| 313 | 166.94 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 10 |
| 367 | 167.43 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 382 | 167.49 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 398 | 167.58 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 413 | 167.66 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 439 | 167.75 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 451 | 167.87 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 458 | 167.91 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 461 | 167.92 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 481 | 167.95 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 509 | 168.09 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 538 | 168.14 | wind | 3.0 | 30 | < th | dose dependent | rect. | 11 | 16 |
| 559 | 168.17 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 562 | 168.18 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 569 | 168.21 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 8 |
| 617 | 168.35 | humidity | 80.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 622 | 168.38 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 18 |
| 628 | 168.39 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 638 | 168.42 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 641 | 168.43 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 642 | 168.43 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 668 | 168.43 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 670 | 168.44 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 706 | 168.51 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 745 | 168.59 | wind | 3.0 | 30 | < th | dose dependent | rect. | 15 | 12 |
| 783 | 168.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 809 | 168.69 | humidity | 70.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 838 | 168.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 855 | 168.78 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 862 | 168.80 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 916 | 168.94 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |