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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0379300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.82 (0.0344) R2 : 0.000274
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0256 (0.0724) R2dN8 : 0.000354 R2N8 : 0.000274
σ : 0.647
deviance : 192.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
185.34 0.64 2.51 1.66 0.0429 -12.3 0.485 72.8 0.0115 23.2 999.2 8 -- --
190.47 0.648 2.83 -0.166 0.0305 -0.0267 0.45 -- 0.00572 23.1 999.2 8 -- --
184.86 0.638 2.39 2.38 0.0458 -20.2 -- 121 0.0099 23.4 998.6 7 -- --
191.12 0.648 2.83 -0.178 0.0292 -0.215 -- -- 0.00137 23.7 997.5 620 -- --
184.62 0.636 2.33 2.73 -- -24.7 -- 147 0.00987 -- 998.3 7 -- --
190.47 0.647 2.83 -0.167 0.0306 -- 0.45 -- 0.0064 23.1 -- -- -- --
191.33 0.648 2.83 -0.186 0.0291 -- -- -- 0.00463 0.0989 -- -- -- --
191.16 0.644 2.83 -0.177 -- -0.213 -- -- 0.00162 -- 997.5 455 -- --
191.92 0.645 2.82 -- 0.031 -0.247 -- -- 0.0206 23.5 997.6 440 -- --
191.38 0.646 2.83 -0.185 -- -- -- -- 0.00505 -- -- -- -- --
192.24 0.649 2.82 -- 0.0267 -- -- -- 0.0253 23.7 -- -- -- --
191.98 0.645 2.82 -- -- -0.248 -- -- 0.0207 -- 997.6 444 -- --
192.29 0.647 2.82 -- -- -- -- -- 0.0256 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 169.01 humidity 80 10 > th dose independent rect. 10 1
3 169.23 humidity 80 10 > th dose dependent rect. 10 1
7 172.75 atmosphere 1005 90 < th dose dependent rect. 8 1
18 175.00 atmosphere 1000 30 < th dose dependent rect. 12 2
29 175.02 atmosphere 1000 90 < th dose independent rect. 12 2
30 175.03 wind 1 10 < th dose independent rect. 13 1
32 175.03 wind 1 10 < th dose dependent rect. 13 1
62 176.70 radiation 40 10 > th dose dependent rect. 13 1
103 176.86 humidity 60 10 < th dose independent rect. 14 1
138 178.19 humidity 60 10 < th dose independent rect. 12 3
169 180.57 radiation 40 10 > th dose independent rect. 13 1
259 181.40 wind 3 10 < th dose dependent rect. 13 7
262 181.43 atmosphere 1005 10 < th dose independent rect. 9 1
270 181.47 wind 3 10 < th dose dependent rect. 9 11
284 181.67 atmosphere 1000 10 < th dose dependent rect. 13 10
291 181.73 atmosphere 1000 10 < th dose dependent rect. 13 7
304 181.79 wind 3 10 < th dose dependent rect. 9 6
341 182.18 atmosphere 1000 270 < th dose independent rect. 10 4
354 182.32 wind 3 10 < th dose dependent sin 22 NA
369 182.50 wind 3 10 < th dose dependent rect. 9 9
375 182.58 humidity 70 10 < th dose dependent rect. 13 1
390 182.71 wind 3 10 < th dose independent rect. 9 6
395 182.74 atmosphere 1000 90 < th dose dependent rect. 2 12
401 182.79 radiation 30 10 < th dose independent rect. 9 1
404 182.79 wind 3 10 < th dose dependent rect. 6 14
449 183.00 atmosphere 1005 270 < th dose dependent rect. 6 1
469 183.04 wind 3 10 < th dose independent rect. 2 13
482 183.14 wind 3 10 < th dose dependent rect. 6 9
488 183.17 atmosphere 1005 720 < th dose independent rect. 8 2
512 183.18 radiation 40 10 > th dose dependent sin 13 NA
525 183.23 atmosphere 1000 30 < th dose independent rect. 13 9
536 183.25 wind 3 10 < th dose independent rect. 9 11
589 183.54 wind 3 10 < th dose independent sin 23 NA
597 183.57 wind 3 10 < th dose independent rect. 9 9
606 183.64 wind 3 10 < th dose independent rect. 6 9
608 183.64 wind 3 10 < th dose dependent rect. 6 12
687 183.99 wind 3 10 < th dose independent rect. 2 18
693 184.02 wind 3 10 < th dose independent rect. 6 14
705 184.08 wind 3 10 < th dose independent rect. 2 16
707 184.09 wind 3 10 > th dose independent rect. 4 14
718 184.15 wind 1 270 < th dose independent rect. 16 1
719 184.15 wind 1 270 < th dose dependent rect. 16 1
738 184.21 atmosphere 1005 90 < th dose independent rect. 8 13
743 184.22 wind 3 10 > th dose independent sin 23 NA
765 184.30 wind 3 10 < th dose independent rect. 6 12
766 184.31 wind 3 30 < th dose independent rect. 9 1
768 184.31 atmosphere 1000 10 < th dose dependent sin 21 NA
775 184.33 wind 3 10 < th dose independent rect. 13 21
776 184.33 wind 3 10 < th dose independent rect. 6 22
784 184.35 wind 3 10 < th dose dependent rect. 2 18
789 184.36 wind 7 10 < th dose dependent rect. 13 21
805 184.43 radiation 40 10 < th dose independent sin 13 NA
809 184.45 radiation 40 10 < th dose dependent rect. 9 1
818 184.49 wind 3 10 > th dose independent rect. 23 19
855 184.63 wind 5 10 < th dose dependent rect. 2 13
856 184.64 wind 3 90 < th dose dependent rect. 18 1
876 184.70 atmosphere 1005 90 < th dose dependent rect. 12 22
881 184.71 atmosphere 1000 10 < th dose dependent rect. 13 16
888 184.73 radiation 40 10 > th dose independent sin 13 NA
912 184.77 atmosphere 1000 720 > th dose independent rect. 2 8
924 184.78 wind 3 10 < th dose dependent rect. 6 22
956 184.85 wind 1 720 < th dose dependent rect. 11 1
979 184.91 atmosphere 1005 90 < th dose independent rect. 8 17